Gene RPB_0250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0250 
Symbol 
ID3907878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp282824 
End bp283738 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content68% 
IMG OID637882133 
Producthypothetical protein 
Protein accessionYP_483872 
Protein GI86747376 
COG category[S] Function unknown 
COG ID[COG2510] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTTGT TCCGGAAAAT CTCCATCGGC CCTGACGAAC ATGGCGCGCA AGCGGCCGGC 
ATTGTCCTGA TGTTGCTGGC GATGCTGGCG TTTTCCTTTG CGGACGCAGT CGGCAAGAAG
GTGGTGGCGA CCTATCCGGT CGGCGAATTC CTGCTGCTGC GGGCGATTGC CGGACTGGTG
CTGCTCGCGC CGCTGATCTG GCGGCAGCGC GCGGCCTTCA TCCGGCTGGA GCGGCCGGGG
CTGCAACTGG CGCGGATGCT GGTCTCGGCG TTCGAGGTCG CGGCGTTCTT CCTCGCCACG
GTGTATCTGC CGCTCGCCGA TGTCATCACG TTCTATCTGG CGTCGGCGCT GTTCGTGTCG
GTCGGGGCCG CCTTGTTTCT CGGCGAGACG ATCGACCGGG CGCGGGCGAT CGCAATCCTG
GTCGGCTTTG CCGGCGTGCT GATCGCATTG CAGCCGTCGC CGCAAACCAT GAGCTGGCCG
GCGCTGATCG CGATCCTCGC CAGCGTGCTG TTCGCGGCGC TGATGCTGAT CACCCGGTTT
CTGCGGCGCA CGCCGGAGAT CGCGCTGGCG ACGCAGCAAT TCATCGGCAC CGCACTGCTC
GGCTCGGTGC TGCTGGCGCC GTCCGGCTGG ATTGCGCCGC CGCCGGCCGA CTGGATCTGG
TTCGTGCTCG CGGGTGTCGG CTCGGCCGCG GGGCTGTTGT GCGTCAACCG CTCGCTGCGG
TTGGCGCCCG CGAGCGTCGT GGTGCCGTAT CAATATACGA TGATCATCTT CGCCGCGGCG
CTCGGCTGGC TGTTCTTCGG CGACGTCCCG ACGCTGTCGA CGCTGGTCGG CGTCGTCGTT
ATCGTCGGCG CGGGCCTGTA TCTCGCGCTG CGCGACCGCA AGACGGCGGA CGAGGCGCCG
CCGCAAACGA ACTGA
 
Protein sequence
MGLFRKISIG PDEHGAQAAG IVLMLLAMLA FSFADAVGKK VVATYPVGEF LLLRAIAGLV 
LLAPLIWRQR AAFIRLERPG LQLARMLVSA FEVAAFFLAT VYLPLADVIT FYLASALFVS
VGAALFLGET IDRARAIAIL VGFAGVLIAL QPSPQTMSWP ALIAILASVL FAALMLITRF
LRRTPEIALA TQQFIGTALL GSVLLAPSGW IAPPPADWIW FVLAGVGSAA GLLCVNRSLR
LAPASVVVPY QYTMIIFAAA LGWLFFGDVP TLSTLVGVVV IVGAGLYLAL RDRKTADEAP
PQTN