Gene RPB_0245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0245 
Symbol 
ID3907873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp279177 
End bp280328 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content64% 
IMG OID637882128 
Producthypothetical protein 
Protein accessionYP_483867 
Protein GI86747371 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGG ATACGCTGAC CACCACCAAT GCCGGCATCG CCGCCCATGG CGCCGAGCGG 
CTGCCGTCGG TCGACGTCGA TACCTACAAT ATCGAGCTGA AGGACGACGA CGGATTTCTC
GGCGACCGCG CCAGCAAGGG CGCATTCCAG CGCATGCTCG ACGCCTCGCG TAAGCCGCTG
CGCAAGACTG GCGACGATCC GCTGGGCAAG AAGCCGACCG AGGAGATCTC CAAGGGCGCG
CTCGACGAGA TTTTGAACGG CGACGACGTC CACGCCGCCG CGCTGGTGCA CGGCGCGATC
GAGGAATTCG CCCAGGAACT GGCCTACGTT ACCGGCCGGT TTCTCAAGAC CAAAGCCTGG
GCCGATACCG AGTGTATCGT GGTCGGCGGC GGCTTCCGCC AGGGCCGGGT CGGGGAACTG
GCGATCGCGC GCACCGATAT CCTACTGAAA TCGGAGGGGC TGAAGGTCGA TCTGGTGCCG
ATCCGGTTCG ATCCGGACGA GGCCGGGCTG ATCGGCTGCC TGCATCTGGC GCCGTCGTGG
ATCTTCGAAG GCCACGACAG CATTCTGGCG GTCGACATCG GCGGCTCGAA CATCCGTTGC
GGCGTGGTCG AAACCGGCTG GAAAAAGGCG CGCGATCTGT CGAAGGCCTC GGTCTGGAAG
GTCGATCTAT GGCGGCACGC CGAAGACGAA CCGACCCGCG AAGGCGCGGT GAAGCGGCTG
ACCAAGATGC TCCAGGGTCT GATCGCCGAC GCCGAGAAGG AGGGCTTCAA GCTGGCGCCG
TTCATCGGGA TTTCCTGCCC CGGCGTGATC AATTCCGACG GCACCATCGA GAAAGGTGCC
CAGAACCTGC CGGGCAACTG GGAAAGCAGC AGGTTTCACC TGCCGCGCAG CCTGCTCGAG
GGGATTCCCA CCATCGGTGA CCACGACACC GCGATCCTGA TGCACAATGA CGGCGTCGCC
CAGGGCCTCA GCGAAGTCCC GTTCATGCAG GACTTCGAGC GCTGGGGCGT GCTCACCATC
GGCACCGGCC TCGGCAACGC CCGCTTCACC AATCGCAAGA CCAAAGAGAA GGGCAAGAAG
GCCAAAGAGA AGGACAAGGA CGACAAGCCC AGCGACAAAC AGAAGGACAA GGAACGCAAG
GAGAAGGCCT GA
 
Protein sequence
MAEDTLTTTN AGIAAHGAER LPSVDVDTYN IELKDDDGFL GDRASKGAFQ RMLDASRKPL 
RKTGDDPLGK KPTEEISKGA LDEILNGDDV HAAALVHGAI EEFAQELAYV TGRFLKTKAW
ADTECIVVGG GFRQGRVGEL AIARTDILLK SEGLKVDLVP IRFDPDEAGL IGCLHLAPSW
IFEGHDSILA VDIGGSNIRC GVVETGWKKA RDLSKASVWK VDLWRHAEDE PTREGAVKRL
TKMLQGLIAD AEKEGFKLAP FIGISCPGVI NSDGTIEKGA QNLPGNWESS RFHLPRSLLE
GIPTIGDHDT AILMHNDGVA QGLSEVPFMQ DFERWGVLTI GTGLGNARFT NRKTKEKGKK
AKEKDKDDKP SDKQKDKERK EKA