Gene RPB_0235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0235 
Symbol 
ID3907862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp268853 
End bp269656 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content69% 
IMG OID637882117 
ProductGntR family transcriptional regulator 
Protein accessionYP_483857 
Protein GI86747361 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGCGA CGTATCGCAG GCCGGCGACC GGGAGTGACG GCACCCACGA GCGGCGGTTC 
GCGCCGCGCA CGCTGCCGGA CCAGGTCGCC GAAGAACTCG GCGCCGAGAT TGTCTCGGGC
CGACGCAAGG CGGGCGAGCG CCTCGTCGAA CTCGATCTGG CGCGCGACTT CGGCGTCAGT
CGCGGGCCGA TCCGCGAAGC GATTCGGATT CTCGAACGTC GCCGGCTGGT CGAATTGCTG
CCGCGGCGCG GCGCCTACAT CAAGCCGGTG TCGCTGAAAT CAGTCGCCGA TCTGTTCAAC
GTCCGCACCG CGCTGTCGAT GCTGGCGGTG CGGACCATGG CGACCACGCC GGTCGAGAGC
TACATCGACA CGCTCGCGCG ACGCTGCGCG GAATTGAAGG CGCAGGTCGA GCCCGACGAT
CCGATCGCCT TCGCGCGGAC CACGACGCGG GCGGTCAAGA CCATTGCGCG CGGCTCCGGC
AATCAGTTGC TGGTCGAACT GCTCACCGAC CTCGCCGACC AGACCGTGTG GACGACGATC
TGGAAATCGC CGCTGGACTA CCAGACGCCG GAGATTCGGC GGCTCAGCGC CGACCTGATG
GCGTCGACGC TGAAGGCAAT CCGGCAGCGC AGGCCGAACG CGGCCGTGAC CCATCTCGGC
GAATTGCTGG AAGGCGACCG CGACCGCGCG CTGGCGACGC TGTCGCAGAT CCGCGGCGAG
GCCTTCGACC TCAGCGCGCT GGCGCATGTC GATGAGACCG GCGCGGCGCC CACGACCATT
GCGGGCAGCG CCCGGACGGC CTGA
 
Protein sequence
MAATYRRPAT GSDGTHERRF APRTLPDQVA EELGAEIVSG RRKAGERLVE LDLARDFGVS 
RGPIREAIRI LERRRLVELL PRRGAYIKPV SLKSVADLFN VRTALSMLAV RTMATTPVES
YIDTLARRCA ELKAQVEPDD PIAFARTTTR AVKTIARGSG NQLLVELLTD LADQTVWTTI
WKSPLDYQTP EIRRLSADLM ASTLKAIRQR RPNAAVTHLG ELLEGDRDRA LATLSQIRGE
AFDLSALAHV DETGAAPTTI AGSARTA