| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0225 |
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| Symbol | |
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| ID | 3909467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 253123 |
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| End bp | 254784 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637882107 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_483847 |
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| Protein GI | 86747351 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCATC TTCATTCCTT CAGCCGCACT GCGGTGCTGC TCGCTCTGAC GGCCGTCGGC
TCTGTCGCCG TGCCGCAGAT CGCTTCATCC GAAACCGTGC TGCGGATCGG CATGACGGCC
GCGGACATTC CGCGCACGCT CGGCCAGCCG GATCAGGGTT TCGAAGGCAA CCGCTTCACC
GGCCTGACGA TGTATGACGG GCTGACGATG TGGGACCTGT CGTCCGCCAC CAAGGCGAGC
GTGGTGATCC CGGGGCTCGC GACCGAATGG AAGGTCGAGG ACGCCGACAA GACCAAATGG
ATCTTCAAGC TGCGCCCCGG CGTCACCTTC CACGACGGCA CGCCTTTCAA TGCCGACGCC
GTGGTCTGGA ATGTCGACAA GGTGCTGAAC AAGGAGGCTG TTCAGTTCGA CGCCAGCCAG
GTCGGCGTCA CCGCGTCGCG GATGCCGACG CTGGTCTCGG CCAAGAAGAT CGACGACATG
ACGGTGGAGC TCACCGCCAA GGAGCCCGAC AGCTTCCTGC CGATCAACCT CACCAATCTG
TTCATCGTCA GCCCGTCGAA ATGGCAGGCG CTGTACGAGA AGGCCGAGGG CGCCGACGCC
AAGGCGCGGT CGCAGGCCGC CTGGGCCGCG TTCGCCAAGG ACGCCGCCGG CACCGGGCCG
TGGAAGATGG CGAAGTTCAC GCCGCGCGAG CGGCTCGAAC TGGTGAAGAA CGACAATTAC
TGGGACAAGG CGCGGGTGCC GAAGACCGAC CGCATGGTGC TGCTGCCGAT GCCCGAAGCC
AACGCGCGCA CCGCGGCGCT GCTGTCCGGC CAGGTCGACT GGATCGAGGC GCCTGCGCCC
GACGCGGTGA AGGAGATCAC CGCGCGCGGC TTCAAGATCG AGAAGAACGA ACAGCCGCAT
GTCTGGCCGT GGCAGTTCTC GCGGATCGAG GGCTCGCCCT GGAACGACAT CCGCGTCCGC
CGCGCCGCCA ATCTGTGCAT CGACCGCGAA GGCCTGCGTG ACGGCCTGCT CGCCGGCCTG
ATGGTGCCGG CGACCGGCAC CTTCGAGCCC GGCCATCCGT GGCGCGGCAA TCCGTCGTTC
CAGATCAAGT ACGATCTGCC GGCGGCGCAG AAGCTGATGA AGGAGGCCGG CTTCGGCCCC
GACAAGAAGC TCAGCGTCAA GGTGCAGACC TCGGCGTCCG GCTCCGGCCA GATGCTGCCG
CTGCCGATGA ACGAATATCT GCAGCAGGCT CTCGCCGAGT GTTACTTCGA CGTCAAGCTC
GATGTCATCG AATGGAACAC GCTGTTCACC AATTGGCGGC GTGGCGTCAA GGATCCCTCG
GCCAACGGCA GCAACGCCAC CAATGTCACC TACGCGGCGA TGGATCCGTT CTTCGCGCTG
GTCCGCTTCC TGCAATCGTC GATGGCGCCG CCGGTGTCGA ACAATTGGGG CTACATCAAC
AACCCCAAGT TCGACGAGTT GGTGAAGAAG GCACGGACCA GCTTCGACGC CGCCGAGCGC
GACAAGGCGC TGGCCGAGCT GAACGCCGCC TCGATCGACG ACGCGGCCTT CCTCTACGTC
GCCCACGACG TCGGCCCGCG CGCGATGAGT CCGAAGGTCA AGGGCTTCGT GCAGCCCAAG
AGCTGGTTCG TCGACTTCTC GCCGGTGTCG ATGGCGCCGT AA
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| Protein sequence | MRHLHSFSRT AVLLALTAVG SVAVPQIASS ETVLRIGMTA ADIPRTLGQP DQGFEGNRFT
GLTMYDGLTM WDLSSATKAS VVIPGLATEW KVEDADKTKW IFKLRPGVTF HDGTPFNADA
VVWNVDKVLN KEAVQFDASQ VGVTASRMPT LVSAKKIDDM TVELTAKEPD SFLPINLTNL
FIVSPSKWQA LYEKAEGADA KARSQAAWAA FAKDAAGTGP WKMAKFTPRE RLELVKNDNY
WDKARVPKTD RMVLLPMPEA NARTAALLSG QVDWIEAPAP DAVKEITARG FKIEKNEQPH
VWPWQFSRIE GSPWNDIRVR RAANLCIDRE GLRDGLLAGL MVPATGTFEP GHPWRGNPSF
QIKYDLPAAQ KLMKEAGFGP DKKLSVKVQT SASGSGQMLP LPMNEYLQQA LAECYFDVKL
DVIEWNTLFT NWRRGVKDPS ANGSNATNVT YAAMDPFFAL VRFLQSSMAP PVSNNWGYIN
NPKFDELVKK ARTSFDAAER DKALAELNAA SIDDAAFLYV AHDVGPRAMS PKVKGFVQPK
SWFVDFSPVS MAP
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