| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0224 |
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| Symbol | |
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| ID | 3909466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 252011 |
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| End bp | 252964 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637882106 |
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| Product | binding-protein dependent transport system inner membrane protein |
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| Protein accession | YP_483846 |
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| Protein GI | 86747350 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.843746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCGTCT ACATCGCCCG CCGCATCGTC TATGTGATTC CGATCGTGCT CAGCGTCGCG
CTGGTGTGCT TTCTCCTGGT GCACATCACG CCCGGCGATC CGCTGGTCGC GGTGCTGCCG
GCGGATGCGT CACAGGAGCT CGCCGCGCAG CTGCGCGCCG CCTACGGCTT CGACCGGCCG
CTGCCGGTGC AGTTCGGGCT GTGGCTGTGG AAGGCGCTGC ACGGCGATCT CGGCACCTCG
ATCGCGACCG GCCGCCCGGT GCTGAGCGAA GTGCTGCGCG CCGTCGGCAA CACCGTGACG
CTGGCGATCG CGGCGGCGAT CATCGGCTTT TCGCTCGGGC TGATGTTCGG CCTGCTGGCC
GGTTACTTCC GCGATAGCTG GATCGACAAA GTCTCGACCT CGATCGCGAT CGCCGGCGTC
TCCGTGCCGC ATTACTGGCT CGGCATGGTG CTGGTGATCA TCTTCTCGGT GCAGCTCAAC
TGGCTGCCTG CGGTCGGCGC CGGCCCCGGC GGCTCGGGGC AATGGGGCTG GGACTGGGCG
CATCTGAAAT ATCTGGTGCT GCCGGCGATC ACCACGTCCG TTATTCCAAT GGGCATCGTC
ACCCGCACCG TGCGGGCGCT GACCGGTGAT ATCCTGTCGC AGGACTTCGT CGAGGCGCTG
CGCGCCAAGG GGCTGCGCGA GACGCAGGTG TTCCGCCACG TGCTGAAGAA CGCAGCCCCG
ACCGCGCTGG CGGTGATGGG CTTGCAGCTC GGCTACATGC TCGGCGGCTC GATCCTGATC
GAGACGGTGT TCTCCTGGCC GGGCTCGGGG CTGTTGCTCA ACTCCGCGAT CTTCCAGCGC
GATTTGCCGC TGCTGCAGGG CACCATCCTG GTGCTGGCGC TGTTCTTCGT GTTCCTCAAT
CTGGTGGTGG ACATCGCGCA GGCCGCGATC GACCCGCGCA TCAAGCGCGC CTGA
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| Protein sequence | MLVYIARRIV YVIPIVLSVA LVCFLLVHIT PGDPLVAVLP ADASQELAAQ LRAAYGFDRP
LPVQFGLWLW KALHGDLGTS IATGRPVLSE VLRAVGNTVT LAIAAAIIGF SLGLMFGLLA
GYFRDSWIDK VSTSIAIAGV SVPHYWLGMV LVIIFSVQLN WLPAVGAGPG GSGQWGWDWA
HLKYLVLPAI TTSVIPMGIV TRTVRALTGD ILSQDFVEAL RAKGLRETQV FRHVLKNAAP
TALAVMGLQL GYMLGGSILI ETVFSWPGSG LLLNSAIFQR DLPLLQGTIL VLALFFVFLN
LVVDIAQAAI DPRIKRA
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