Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0210 |
Symbol | |
ID | 3909451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 236229 |
End bp | 237053 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637882091 |
Product | AraC family transcriptional regulator |
Protein accession | YP_483832 |
Protein GI | 86747336 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.85611 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCAC ATTCCTTGCA GATCGCCGGC GAACGAGTCT GTGCGCGCCA TGCGGCCGGC GTATCTTCCG CGAGTTCGAT GGGGCGATGT CAGCAGCCGG ACGAGGTCTG GTCCGGGCAC TTGCGGAACC GCGAGCGATC GAATTTCGAT TTGAAGAAAA TGGCCGCGTT GATTCGGGCC CTCACCGCCG AAGGTGGTGC GACGCCCGGA ATCGTGAGCG GCTTGCGGCC GCCGGCCGCG AGCGGCGGCG AGACGGTGCT GAATTTCCGC GATCGGAGTG AAGGCCGTCC GGGCCCGGGT GATCCGCCCT GTACGGATGA CGACCCATTA GTGATCCGGC TGTCGGAAGC ATTGGCGGCC GCCGAGTGCG ATTCGTCGGA ATTCGCCGAC CTCTACGCCG ATGCGATCCG CGTCGTCACG GCCGTGCGGA AGCTGAGCAT GCAGCCGCCG GCCGCGCTAA TCGAGGACCG GAAGCCGACC GGCGGCGCGG TGTTGCCGAA GTGGCGGCTG AAGCTGGTCG CCAATTATGT CTCCGAGCAT CTCGCGGAGA AGGTGACGCT GGCCGACATG GCGGCGGCGG CGCGGTTGAG CCGGATGCAT TTCGCCGCAC TGTTCCTGCG CGCGACCGGG CTGCGGCCTC ATGAATATCT GCTGAAGCGG CGCATCGCCG CGGCGCAGGA GCTGCTGCAG ACGGGCGATC TGCCGATCGT CCAGGTCGCC ATGCAGGTCG GATTCCAGAC CCAGGCGCAC TTCACCACCG TGTTCAAGAG GATCACGGGC CACACCCCGG CGAAGTGGCG ACAGACGATG CGGCCACACG ACTGA
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Protein sequence | MSSHSLQIAG ERVCARHAAG VSSASSMGRC QQPDEVWSGH LRNRERSNFD LKKMAALIRA LTAEGGATPG IVSGLRPPAA SGGETVLNFR DRSEGRPGPG DPPCTDDDPL VIRLSEALAA AECDSSEFAD LYADAIRVVT AVRKLSMQPP AALIEDRKPT GGAVLPKWRL KLVANYVSEH LAEKVTLADM AAAARLSRMH FAALFLRATG LRPHEYLLKR RIAAAQELLQ TGDLPIVQVA MQVGFQTQAH FTTVFKRITG HTPAKWRQTM RPHD
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