Gene RPB_0145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0145 
Symbol 
ID3908116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp158053 
End bp158784 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content67% 
IMG OID637882027 
ProductABC transporter related 
Protein accessionYP_483768 
Protein GI86747272 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAGCG AACTGATCCT CGAAGCCAAA GGCCTCGACG CCGGCTACGG CGAAATCCAG 
GTGCTGTGGG GCATCGACCT CGCGGTGCGC CGCGGCGAGA TCACCGCGCT GATCGGCTCC
AACGGCGCCG GCAAGACCAC GCTGATGCGC GCACTGTCCG GGCTGATCCC GGTCCGCGCC
GGCCGATATC TCTCCGAAGC AGAGGACATC ACCGGGAGCA CGGCCGCGCA GATCCTGACC
CACGGCATCG TCCACGTCCC GGAAGGCCGG CGGCTGTTCG GCGCGATGAG CGTCGAGGAA
AATCTGATGA TGGGCGCGTA TTTGCGTAAA GCGAGCCGCG CCGAGATCAA ACGCGACCTC
GACCGCGTCT ACGCCACCTT CCCGAAACTG CGCGAGCGCG GCAACCAGCA GGCCGCGACG
CTGTCCGGCG GCGAGCAGCA GATGTGCGCG ATCGGCCGCG GCCTGATGAG CGCGCCGAAA
CTGCTGATGA TCGACGAATT GTCGCTCGGG CTGTCGCCGC TGCTGGTCGA GCAGCTGGTC
GATGCGCTGC GGGTGCTGAA CGCCGGCGGC ACCTCGATCC TGCTGGTCGA GCAGGACGTC
ACCATCGCGC TCGACCTCTG CCACCGCGCC TTTGTCATGG ATATGGGCCG GATCGTGCGC
GAGGGCTCGG GCGAGGATCT GCTCGCCGAC CCGATCGTGC GCGACGCCTA TCTGGGCGTG
CTGCAGGACT GA
 
Protein sequence
MASELILEAK GLDAGYGEIQ VLWGIDLAVR RGEITALIGS NGAGKTTLMR ALSGLIPVRA 
GRYLSEAEDI TGSTAAQILT HGIVHVPEGR RLFGAMSVEE NLMMGAYLRK ASRAEIKRDL
DRVYATFPKL RERGNQQAAT LSGGEQQMCA IGRGLMSAPK LLMIDELSLG LSPLLVEQLV
DALRVLNAGG TSILLVEQDV TIALDLCHRA FVMDMGRIVR EGSGEDLLAD PIVRDAYLGV
LQD