Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0145 |
Symbol | |
ID | 3908116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 158053 |
End bp | 158784 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637882027 |
Product | ABC transporter related |
Protein accession | YP_483768 |
Protein GI | 86747272 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAGCG AACTGATCCT CGAAGCCAAA GGCCTCGACG CCGGCTACGG CGAAATCCAG GTGCTGTGGG GCATCGACCT CGCGGTGCGC CGCGGCGAGA TCACCGCGCT GATCGGCTCC AACGGCGCCG GCAAGACCAC GCTGATGCGC GCACTGTCCG GGCTGATCCC GGTCCGCGCC GGCCGATATC TCTCCGAAGC AGAGGACATC ACCGGGAGCA CGGCCGCGCA GATCCTGACC CACGGCATCG TCCACGTCCC GGAAGGCCGG CGGCTGTTCG GCGCGATGAG CGTCGAGGAA AATCTGATGA TGGGCGCGTA TTTGCGTAAA GCGAGCCGCG CCGAGATCAA ACGCGACCTC GACCGCGTCT ACGCCACCTT CCCGAAACTG CGCGAGCGCG GCAACCAGCA GGCCGCGACG CTGTCCGGCG GCGAGCAGCA GATGTGCGCG ATCGGCCGCG GCCTGATGAG CGCGCCGAAA CTGCTGATGA TCGACGAATT GTCGCTCGGG CTGTCGCCGC TGCTGGTCGA GCAGCTGGTC GATGCGCTGC GGGTGCTGAA CGCCGGCGGC ACCTCGATCC TGCTGGTCGA GCAGGACGTC ACCATCGCGC TCGACCTCTG CCACCGCGCC TTTGTCATGG ATATGGGCCG GATCGTGCGC GAGGGCTCGG GCGAGGATCT GCTCGCCGAC CCGATCGTGC GCGACGCCTA TCTGGGCGTG CTGCAGGACT GA
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Protein sequence | MASELILEAK GLDAGYGEIQ VLWGIDLAVR RGEITALIGS NGAGKTTLMR ALSGLIPVRA GRYLSEAEDI TGSTAAQILT HGIVHVPEGR RLFGAMSVEE NLMMGAYLRK ASRAEIKRDL DRVYATFPKL RERGNQQAAT LSGGEQQMCA IGRGLMSAPK LLMIDELSLG LSPLLVEQLV DALRVLNAGG TSILLVEQDV TIALDLCHRA FVMDMGRIVR EGSGEDLLAD PIVRDAYLGV LQD
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