| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0141 |
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| Symbol | |
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| ID | 3908112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 154064 |
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| End bp | 155284 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637882023 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_483764 |
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| Protein GI | 86747268 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.202322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCACG CGTGGGTTGC TCGCTGCGTT CGCCTCTCGA TCCCGCTCGG CATTGCCGCG
CTGGCATCCG GAATCCAGAT ATCCGCAGCG TCGGCCGACG ACGTCATCAA GATCGGCGCG
CCGCTGCCGA TCACCGGGCC GCTGGCGCCG GAAGCCATCA AGCAGCAGCA GGGCTACAAT
CTGTGGGCCG AACAGGCCAA CAAGGCCGGC GGCATTTCGG TCGGCGGCAA GAAGTACAAG
GTCGAGATCG TCTACACCGA CTACCAGTCG AACACGCCGC GCGCGGTGCA GGCGACCGAG
CAGCTGATCA CCCAGAACAA CGTCAACTTC GTGTTCTCGC CGTTCGGCTC CGGTGCGGCG
AAGGCGGCCA GCACGGTGTC GGAAAAGCAC AAGGTGCCGA CGCTGGCGGC GACCGCCTCG
TCGTCCCAGG TCTACGACCA GGGCTACAAA TATCTGTTCG GCACCTTCAC CCCGAACGAC
ACCCTGACCA CGCCGCTGAC CGAAATGATC AAGGCCAAGG TGCCCGAGGT CAAGAAGGTC
GCGATCCTCG CCCGCAACGA TCTGTTCCCG CTGGCGATCG CGCAGGAGAT GGAGAAGTCG
GCCAAGGCCA ACGGCCTCGA GGTGGTGTAT TTCGAGAAAT ACGCGATCGG CACGCTCGAC
CATTCCGCCA CGCTGTCGTC GATCAAGGCG CAGTCGCCGC AGTGGATCTT CGTCACCGGC
TACACCAACG ACCTGCTGCT GGTGCGCAAG CAGATGATCG ACCAGCAGAT GAAGGCCCCG
GTGGTCTCGA TGATCGCCGG CCCGGCCTAT CAGGAGTTCA TCGACGCGCT CGGCAAGGGG
GCCGAGAACG TCTCGAGCGC CGCCTGGTGG CATCCGGCCG CGCGCTATGA CGGCAAGGAC
ATCTTTGGCT CCACCGCCAA TTTCGTGAAG CTGTTCAAGG ACAAGTACAA CGCCGAACCG
GACTACGCGC ATGCTTCGGC GGCGCTGTGC GGCGCGCTGT TCCAGATCGC GATCGAGAAG
GCCGGTTCGA TCGATCGCGA CAAGGTGCGC GACGAACTCG CCAAGATGGA CGTCGTCACC
TTCTTCGGCC CGGTCAAGTT CGGCGCCAAC GGCCAGATCA ACTCGCTCGA CCCGCCGGTC
TTCCAGATCC AGGGCGGCAA GCCGGTGGTG CTGTTCCCGC AGGCGATCAA GCAAGGCGAC
CTCAAGATCG GCCTCGAGTA A
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| Protein sequence | MLHAWVARCV RLSIPLGIAA LASGIQISAA SADDVIKIGA PLPITGPLAP EAIKQQQGYN
LWAEQANKAG GISVGGKKYK VEIVYTDYQS NTPRAVQATE QLITQNNVNF VFSPFGSGAA
KAASTVSEKH KVPTLAATAS SSQVYDQGYK YLFGTFTPND TLTTPLTEMI KAKVPEVKKV
AILARNDLFP LAIAQEMEKS AKANGLEVVY FEKYAIGTLD HSATLSSIKA QSPQWIFVTG
YTNDLLLVRK QMIDQQMKAP VVSMIAGPAY QEFIDALGKG AENVSSAAWW HPAARYDGKD
IFGSTANFVK LFKDKYNAEP DYAHASAALC GALFQIAIEK AGSIDRDKVR DELAKMDVVT
FFGPVKFGAN GQINSLDPPV FQIQGGKPVV LFPQAIKQGD LKIGLE
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