| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0135 |
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| Symbol | |
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| ID | 3908106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 146884 |
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| End bp | 148467 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637882017 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_483758 |
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| Protein GI | 86747262 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.868038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGAAAGC TCGCACAGCT CGCTTATCAG GAAGCCGGTC GCAACGGTTC GCTCGATCGT
TCGGCAAATG CCTCCGCGAA TGCCGCATCG TTAGGCAACA GCGATGCGCT GTTCTGGGGC
GCCTTATTCC GCGGAATGGA TCGCGGCGGG TCGTTTCTGC AACTGCAGAT CCGCCAGATC
ATCGTCACCG CGATCGAAGA CGGCCGGCTG CCGCTCGGGA TGCGGATGCC GTCGAGCCGC
GATCTCGCCG CGGTGCTCAA GGTGTCGCGC AACACCGTTG TGATCGCCTA CGAGCAGCTG
GTCGACCAGA ACTTCCTGGT GTCGCGGCAG CGCAGCGGCT ACTTTGTCGC CGGCCTGTCG
AAGAAGGTCG CCTCCGGCGC CGGCAAGCCT GCCGAGGCGG CGAGCCGCGA CGATGCGCAT
TGGGCCGCGC GCTACGCGGT GCAGCCGTCG GCGCATCGCA ACATCGTCAA GCCCGCCGAC
TGGCAGGCGC AGCCCTACCC TTTCATCTTC GGGCAGTTCG ACCCCAGCCT GTTTCCGACC
AACGACTGGC GCGAATCCGC GCGGGCCGCG CTGAGCGTCC CCGAGATCAA CAACTGGGCG
CGTGACCTGA TCGACGGCGA CGACCCGGCG CTGATCGAGC AGTTGCAGCT TCAGGTGCTG
CCGCGCCGCG GCATTCATGC GCGCTCCGAC GAAATCATGA TGACGATCGG CGCGCAGCAC
GCGCTGTATC TGATCGCGAC GCTGTTCATC AACGACCGCA CCCGCGTCGG CATCGAGGAG
CCCGGCTATC CCGACGCGCG AAACATCTTC CGGATGCTGA CGCCCGACGT CGTCCCGCTC
GCCTCCGACG CGCAGGGCCT GTTGCCGGAC GAGCGCTTGC AGAGTTGCGC GCTGGCCTAT
GTCACCGCCA GCCATCAATG CCCGACCGCG ACGGTGATGC CACTGCAGCG GCGACTGGAG
TTGCTCAAGG CCGCCGAGAC CGGCGACGTC GTGCTGGTGG AGGACGACTA CGAGGGCGAA
CTGATGCCGG AGGCGGCGAC GCTGCCGCCG CTGAAGAGCC TCGATCACGC CAGCAACGTG
CTCTATGTCG GCAGCCTGTC GAAGGCGCTG GCACCCGGGC TGCGGCTCGG CTACGTGGTG
GCGCCCGCGC CGGTGATCCG CGAGCTGCGG GCGCTGCGGC GGCTGATGCT GCGCCACCCC
CCGCTCAACA ACCAGCGCGT CGCCGCATTG TTCATCGGGC TCGGGCACTA TCGCTCGCAT
CTGGCCCAGG TCGGCCGCGT GCTGCTGGAG CGCGCCAAGA TGCTCGACCG CCTGCTGCCG
AAACATCTGC CGGACTGCAG CTTCTCGCGC GGACCGGGCA GCACCAACTA CTGGATCGCC
TGCCCGCCCG GTACCGACAC CACGGCACTG GCGCGGGAAG CGCTGGCGCA GGGCGTGGTA
ATCGAGCCGG GCGCGGTGTT CTCGATGGAC GAGACCGCCA GCCGGCATTG CTTCCGGCTC
GGCTTCTCCT CGATCCGCAC CGACCGGATC GAAACAGGCA TCCAGCGCCT CGGCGAAGTG
ATTGCGGAGT ATTTGAAGAA GTAG
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| Protein sequence | MGKLAQLAYQ EAGRNGSLDR SANASANAAS LGNSDALFWG ALFRGMDRGG SFLQLQIRQI
IVTAIEDGRL PLGMRMPSSR DLAAVLKVSR NTVVIAYEQL VDQNFLVSRQ RSGYFVAGLS
KKVASGAGKP AEAASRDDAH WAARYAVQPS AHRNIVKPAD WQAQPYPFIF GQFDPSLFPT
NDWRESARAA LSVPEINNWA RDLIDGDDPA LIEQLQLQVL PRRGIHARSD EIMMTIGAQH
ALYLIATLFI NDRTRVGIEE PGYPDARNIF RMLTPDVVPL ASDAQGLLPD ERLQSCALAY
VTASHQCPTA TVMPLQRRLE LLKAAETGDV VLVEDDYEGE LMPEAATLPP LKSLDHASNV
LYVGSLSKAL APGLRLGYVV APAPVIRELR ALRRLMLRHP PLNNQRVAAL FIGLGHYRSH
LAQVGRVLLE RAKMLDRLLP KHLPDCSFSR GPGSTNYWIA CPPGTDTTAL AREALAQGVV
IEPGAVFSMD ETASRHCFRL GFSSIRTDRI ETGIQRLGEV IAEYLKK
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