| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0118 |
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| Symbol | |
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| ID | 3908089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 129405 |
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| End bp | 131093 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637882000 |
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| Product | hypothetical protein |
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| Protein accession | YP_483741 |
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| Protein GI | 86747245 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGCA GGCCGAAGCG TGGCGCATTT TCCGCCGGCG GCGTCGCGGC GCCGCTGCGC
TATGCGCTGT TCCGGCGGAT CTGGCTGGCC AGCCTGCTGT CCAATCTCGG CCTGATGATC
AACGGCGTCG GCGCCGCCTG GGCGATGACC CAGATGACGT CCTCGGCCGA CAAGGTGGCC
TTGGTGCAGA CCGCCCTGAT GCTGCCGATC ATGCTGGTGG CGATGCCGGC CGGCGCGATC
GCCGACATGT ATGACCGCCG GCTGGTCGGG CTGGCGTCGC TGACGCTCGG CCTCGGCGGC
GCCACGGCGC TCGCGGTGCT GGCGCATCTC GGCCTGGTGA CGCCGGAGAT CCTGCTCGCC
TTCTGCTTCG TGATCGGCAC CGGCATGGCG CTGTTCGGCC CCGCCTGGCA GGCCTCGGTC
AGCGAGCAGG TGCCGGGCGA GGCGTTGCCG GCCGCGGTGG CGCTGAACGG TATCAGCTAC
AACATCGCCC GCAGCTTCGG CCCCGCGGTC GGCGGCATCG TGGTGGCAAG CGCCGGCGCG
GTCGCGGCAT TCGCGGCGAA TGCGGTGCTG TATCTGCCGC TGCTGGCGGT GCTGTTGCTG
TGGCGGCGGG TCAGCGAGCC GCCGCGGTTG CCGCCGGAGC GGCTCAACCG CGCGATCGTG
ACCGGCGTGC GCTACATCGC CAACTCGCCG TCGATCCGGA TCGTGCTGGC GCGAACGCTG
ATCACCGGCA TCGCCGGCTC GTCGGTGCTG GCGCTGATGC CGCTGGTGGC GCGCGACCTG
CTGAAGAGCG GCGCCGAGAC CTACGGCATC CTGCTCGGCG CGTTCGGGGT CGGCGCGGTG
ATCGGCGCGC TCTATGTCGG GATGGTGCGC GAGCGGATGA GCAGCGAGGC CGCGATCCGC
AGCTGCGCGC TGATCATGGG CGTGGCGATG GCGGCGGTGG CGATGAGCCG CTGGTCGATA
CTCACCGCCG CGGCGCTGGT GATTGCGGGC GCGGTGTGGA TGCTGGCGAT CGCGCTGTTC
AACATCGGCG TGCAGCTGTC GGCGCCGCGC TGGGTCGCCG GCCGCTCGCT GGCGGCGTTC
CAGGCCTCGA TCGCCGGCGG CATCGCGATC GGGAGCTGGG GCTGGGGCCA CGTCGCCGAT
CTCTCGGGCG TCGCGCCGTC GATGCTGATC TCGGCGGGCG CCATGGTCGT CTCGCCGCTG
CTCGGGCTGT GGCTGCGGAT GCCGGCGGTC GGTACCCAGA TCGAGGACGC CGACCTCCTG
GCCGACCCGG AAGTGCGGCT GGCGCTGACG CCGCGCAGCG GACCGCTGGT GGTCGAGATC
GAGTACCGCG TCGATCCCGA CGACGCCCGC GCGTTTCACG GGGTGATGCA GCAGGTGCAG
CTCAGCCGCC AGCGCAACGG CGCCTATGGC TGGTCGATCG CCCGCGACAT CGCCGATCCG
GAATTGTGGA CCGAGCGCTA TCACTGCCCG ACCTGGCTCG ACTACTTGCG GCAGCGCAAC
CGCTCGACCC AGGACGATCG CAATCTGCAT CAGCGCGCGA TGGCGTTCCA CCGCGGCGCA
GACCCGATCC GGGTCCGCCG GATGCTGGAG CGGCCGTTCG GATCGGTGCG CTGGAAGGAC
GATTCGCCCG ATCGCGCCAC CGGCACCGAA GTGCTGCCGG TCGCCGGCGT CAGCGGCGGC
TCGACCTGA
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| Protein sequence | MTGRPKRGAF SAGGVAAPLR YALFRRIWLA SLLSNLGLMI NGVGAAWAMT QMTSSADKVA
LVQTALMLPI MLVAMPAGAI ADMYDRRLVG LASLTLGLGG ATALAVLAHL GLVTPEILLA
FCFVIGTGMA LFGPAWQASV SEQVPGEALP AAVALNGISY NIARSFGPAV GGIVVASAGA
VAAFAANAVL YLPLLAVLLL WRRVSEPPRL PPERLNRAIV TGVRYIANSP SIRIVLARTL
ITGIAGSSVL ALMPLVARDL LKSGAETYGI LLGAFGVGAV IGALYVGMVR ERMSSEAAIR
SCALIMGVAM AAVAMSRWSI LTAAALVIAG AVWMLAIALF NIGVQLSAPR WVAGRSLAAF
QASIAGGIAI GSWGWGHVAD LSGVAPSMLI SAGAMVVSPL LGLWLRMPAV GTQIEDADLL
ADPEVRLALT PRSGPLVVEI EYRVDPDDAR AFHGVMQQVQ LSRQRNGAYG WSIARDIADP
ELWTERYHCP TWLDYLRQRN RSTQDDRNLH QRAMAFHRGA DPIRVRRMLE RPFGSVRWKD
DSPDRATGTE VLPVAGVSGG ST
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