Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0114 |
Symbol | |
ID | 3909701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 124356 |
End bp | 124835 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637881996 |
Product | hypothetical protein |
Protein accession | YP_483737 |
Protein GI | 86747241 |
COG category | [S] Function unknown |
COG ID | [COG4103] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.544151 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGGATA AACTGCGCCA ATTCATTTCC GACGTCGTCG CGCCGACCGC GCCGGACGAA CTCACCCTCG ACGACGGCGG CTACCGGCTG GCCGCCACGG CGTTGCTGAT TCACGTCATC TCGCTCGACG GCGATCCCTC CGAGGTCGAA CGCCGCAAAT TGCAGGATCT GCTGGAGACC CGCTTCGAGC TCGATGCGGC GACCGCGAGC CGGCTGATCG CCTCGGCGAC GCTGGTCGAG GGAGAGGCGG TCGATCTGTA TAATTTCACC AGCGTCATCA TGCGCTCGGT CAACGAGCAG GGCCGGCTGC GGATCATCGA GATGATGTGG GAGCTGGTGT TCGCCGACGG CCAGGTCACC GAGTTCGAGG AGAACGTGGT GTGGCGCGCG GCCGACCTGC TCGCGGTGTC GTCGCGCGAC CGTATCAATC TCAAGCGCCA GGTCGCCGCA CAGCAATCGG AAACCGACCC CGCGAACTAA
|
Protein sequence | MLDKLRQFIS DVVAPTAPDE LTLDDGGYRL AATALLIHVI SLDGDPSEVE RRKLQDLLET RFELDAATAS RLIASATLVE GEAVDLYNFT SVIMRSVNEQ GRLRIIEMMW ELVFADGQVT EFEENVVWRA ADLLAVSSRD RINLKRQVAA QQSETDPAN
|
| |