Gene RPB_0114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0114 
Symbol 
ID3909701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp124356 
End bp124835 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content65% 
IMG OID637881996 
Producthypothetical protein 
Protein accessionYP_483737 
Protein GI86747241 
COG category[S] Function unknown 
COG ID[COG4103] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.544151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGATA AACTGCGCCA ATTCATTTCC GACGTCGTCG CGCCGACCGC GCCGGACGAA 
CTCACCCTCG ACGACGGCGG CTACCGGCTG GCCGCCACGG CGTTGCTGAT TCACGTCATC
TCGCTCGACG GCGATCCCTC CGAGGTCGAA CGCCGCAAAT TGCAGGATCT GCTGGAGACC
CGCTTCGAGC TCGATGCGGC GACCGCGAGC CGGCTGATCG CCTCGGCGAC GCTGGTCGAG
GGAGAGGCGG TCGATCTGTA TAATTTCACC AGCGTCATCA TGCGCTCGGT CAACGAGCAG
GGCCGGCTGC GGATCATCGA GATGATGTGG GAGCTGGTGT TCGCCGACGG CCAGGTCACC
GAGTTCGAGG AGAACGTGGT GTGGCGCGCG GCCGACCTGC TCGCGGTGTC GTCGCGCGAC
CGTATCAATC TCAAGCGCCA GGTCGCCGCA CAGCAATCGG AAACCGACCC CGCGAACTAA
 
Protein sequence
MLDKLRQFIS DVVAPTAPDE LTLDDGGYRL AATALLIHVI SLDGDPSEVE RRKLQDLLET 
RFELDAATAS RLIASATLVE GEAVDLYNFT SVIMRSVNEQ GRLRIIEMMW ELVFADGQVT
EFEENVVWRA ADLLAVSSRD RINLKRQVAA QQSETDPAN