| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0112 |
|---|
| Symbol | |
|---|
| ID | 3909699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 122378 |
|---|
| End bp | 123181 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637881994 |
|---|
| Product | glutamine amidotransferase |
|---|
| Protein accession | YP_483735 |
|---|
| Protein GI | 86747239 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0518] GMP synthase - Glutamine amidotransferase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCTGC GACCGATTGA CGATTTTTCC CGGGTGGCCT CGCCCGCGCT GCAGCCCGCC
GGCCAGGCGG CGGACACGCG GCCGGTGCTG ATGATCCTGC ATCAGGAGAC CTCGACGCCC
GGCCGGGTCG GCAACGCGCT GCGCGCTTTG GGCCATCCGC TCGATATCCG CCGGCCGCGA
TTCGGCGCCG CCCTTCCGGA GACGCTCGAT GGCCACGCCG GCGTGGTGGT GTTCGGCGGC
CCGATGAGCG CCAATGATCC CGACGACTAT ATCCGCCGCG AGATCGACTG GATCGCCGTG
CCGCTGCGGG AGAGGCGGCC GTTTCTCGGA ATCTGCCTCG GCGCGCAGAT GCTGGCGGCG
CAGCTCGGCG CCCGCGTTTC GCCGCATCCG GAGGGCCGCG CCGAGATCGG CTATTACGAC
ATTCGCCCGA CCGCGGCCGG TCTGGCGATG TGCGCGCAAT GGCCGCGGCA GGTGTATCAC
TGGCACTGCG AGGGCTTCGC TCTGCCGACC GGCGCCGAGT TGTTGGCCGA GGGCGGCGAC
TTCCCGGTGC AGGCGATCCG CGCCGGCAGT GCTTACGGGT TGCAGTTCCA CCCCGATGTC
ACCTGCGCGA TGCTGCATCG CTGGACCACC CGGGGCCATG AGCGACTGGA GCTGCCGGGC
GCCCGGCCGC GCCGCGATCA CTTCGCCGAC CGCGCGCTGC ACGACGCGGC CGAACGCGCC
TGGCTGGCGG ACTTCCTCGA TCACTGGCTG ACGCGAATGC CGGCCGCATT GCCGGCGCTG
CCGCTGCGCG AAGCGGCCGA ATAA
|
|---|
| Protein sequence | MLLRPIDDFS RVASPALQPA GQAADTRPVL MILHQETSTP GRVGNALRAL GHPLDIRRPR
FGAALPETLD GHAGVVVFGG PMSANDPDDY IRREIDWIAV PLRERRPFLG ICLGAQMLAA
QLGARVSPHP EGRAEIGYYD IRPTAAGLAM CAQWPRQVYH WHCEGFALPT GAELLAEGGD
FPVQAIRAGS AYGLQFHPDV TCAMLHRWTT RGHERLELPG ARPRRDHFAD RALHDAAERA
WLADFLDHWL TRMPAALPAL PLREAAE
|
|---|
| |