| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0111 |
|---|
| Symbol | |
|---|
| ID | 3909698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 121412 |
|---|
| End bp | 122239 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637881993 |
|---|
| Product | enoyl-CoA hydratase |
|---|
| Protein accession | YP_483734 |
|---|
| Protein GI | 86747238 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.503929 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCC GGGACATCCT CTATCAGGAC ATCCTCTATG AGGTCGCCGA CAGGATCGCG
ACGATCACGC TGAACCGGCC GGACCGGATG AATGCGTGGA CGCCGGTGAT GGAGCGCGAG
GTGCGCGAGG CGATGGAAAC AGCCGCAGAA GACGCCGAGG TCCGCGTCAT CGTGCTGACC
GGCGCCGGCC GCGGCTTCTG CGCCGGCGCC GACATGCAGG TGCTGCAGAC CATCGATCCG
TCCGATGTCC GCCGCGCCTC GAGCCTGCCG CCGTTCGACA TGAACCGCCG GGCCGACTGG
CAAACCCGCT ACGCGTTCTA TCCGGCGATT CCCAAGCCGA TCATCGGCAT GCTGAACGGC
GCCACCGCCG GAATCGGGCT GGTGCACGCG CTGTATTGCG ACGTCCGCTT TGCCGCCGAC
AGCGCGGTGT TCACCACCGC GTTCGCGCGG CGCGGGCTGA TCGCCGAGCA CGGCATTTCC
TGGATGCTGC CGCGGATCGT CGGCCACGCC AATGCGCTCG ACCTGTTGCT GTCGGCGCGG
CGGGTCTCGG CCGAGGAGGC GCTGCGGATT GGTCTCGTCA ACCGGCTGGT TCCGTCCGAG
CAGCTCCGCG AGCAGACCTA CGCCTACGCC CGCGATCTCG CCGACAATGT TTCGCCGGCG
TCGATGCGGG TGATCAAGCG GCAGCTCTAC GAGGTGCCGT TCCAGACGCT CGCCGAGGCG
ACCATCGAGG CCAATCGCGA GATGGTCGTC TCGCTCGGCA GCGACGATTT CAAGGAAGGC
GTCGCCAGCT TCGTCGAGAA GCGCCCGCCG CAGTTCCGCA GCGTGTGA
|
|---|
| Protein sequence | MSTRDILYQD ILYEVADRIA TITLNRPDRM NAWTPVMERE VREAMETAAE DAEVRVIVLT
GAGRGFCAGA DMQVLQTIDP SDVRRASSLP PFDMNRRADW QTRYAFYPAI PKPIIGMLNG
ATAGIGLVHA LYCDVRFAAD SAVFTTAFAR RGLIAEHGIS WMLPRIVGHA NALDLLLSAR
RVSAEEALRI GLVNRLVPSE QLREQTYAYA RDLADNVSPA SMRVIKRQLY EVPFQTLAEA
TIEANREMVV SLGSDDFKEG VASFVEKRPP QFRSV
|
|---|
| |