| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0102 |
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| Symbol | |
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| ID | 3909688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 109910 |
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| End bp | 112177 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637881983 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_483725 |
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| Protein GI | 86747229 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.058066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.995779 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCCCT CTCCGACTGC TTCCGGGCGC AACCGTCGCC TGCTGTCCTC CGTCGCCCTG
ACGGCTCTGC TGTGGCCCGC TGCCGGCCAC GCCCAATCCG CGCCGCGCGG CCTCGACCCG
ATCGTGGTCG AAGGCCAGAC CGCGCGGCCG TCCAAGCCGC GCGCGGCTTC GTCCGCGGCC
GGCTCGTCGC GGACGCGCCG GGCCTCGGCG CCCGCGTCAC GCCCGCCTGC CGCGCCTGCT
GCCGCGCCGT CAGCCGCCGT CGCAGCCGTG CCGACCTTCA ATCTCGGCAC GATGGCATCG
ACCGCCAGCC GCCTCGGATT GACGCCGCTG CAGACCCCCG CCTCCGTCGA CATCATCACC
GCACAGACCA TCGCCGAGCG CGGCCAGCGC GATGTGCTCG ACGCGGTCAC TCAGAACGCC
ACAGGCATCA CGGCAACACC GGAGCCGGGC AATGGCGGCG TGGTGTTCTC GACCCGCGGT
TTCAGCGGCA CCGGTTCGGT GATGACCCTG TATGACGGCA CCCGCCTGTA TGTCGGCGCC
GGCACCGTGA CCTTCCCGTT CGACACCTGG TCGGCCGAGC GCATCGAGGT GCTACGCGGC
CCCGCCTCGG TGATGTACGG CGAAGGCGCG ATCGGCGGCG CCATCAACGT GATCACCAAG
CAGCCGCTCG ACGTGCAGCG CAACCAGGCC GAAGTGTCGC TCGACACCAA TCTGACGCGA
CGGATCGCGG TCGACTCCGG TGGTCCGATC AACAAGGATG TCTCCTATCG CATCACCGCC
ACCGGCAACA TGTCCGACGG TTGGGTCGAT CGCGACAAGA CTTCGAACAT CGCCGTCTCG
GCCGCCGTCA AGGTGAAGCA GACCGACCAC CTGACCTGGA CCCTGTCCAC CGCCTATGGC
GACCGCCACC CGTCGCTGTA TTACGGCACG CCGCTGGTCA ATGGCCGGCT CGACGAATCG
CTGCGTTTCA AGAACTACAA CGTCGGCGAC AGCAGCATCC GCTATCAGGA CAGCTGGACG
CAGTTGAAGT CCGAGTGGCA GGTGACCGAC AGCATCACCG TCCGCAACGC GCTGTACTAT
CTGAACAGCC GCAGGCACTG GAAGAGCGCG GAGGAATACG CCTTCAACCC GACCACCCGC
CAGGTCGACC GCAGCACTTA TCTGGAGATC TTCCACGACC AGCAGCAGAT TGGCGACCGC
ATGGATGCGA CGGTGCGCGG CCATCTGTTC GGACTGGAAA ACACCTTTGT CGCCGGGTTC
GACGTCAACC GCATCAACTT CAAGCACACC AATAATTCGC CCTACGGCGG AACGTCGTCG
GTCGATCCGT ACAATTTCGA TCCGGGCTTG TTTGCGAGCC CGGATCTGAC ACGACCGGGC
TATTCCAGCG TCACCAATCA GTATGCGGTG TTCGCCGAGA ACCGTCTGCA ACTCACCGAG
CAATTGGCGC TGATCGGCGG CATCCGGCAG GACCAGCCGA CCGTGGAGCG GACCGATCTG
CGAAACCCGG CTAACAATTA CACCCGATCG TATTCTTCGA CGACGTGGCG GGCCGGGGCG
GTGTACACGC CGATCCAGGA CCTCGCCTTC TACGGCCAAT ATTCGACCGC GGTCGATCCG
GTCGGCGGTT TGGTGACGGC GAGCAACGCC AATGCGAAGT TCGAACTGGC GACCGGCAAG
CAGGTCGAGA TCGGCGTCAA GCAATCGTTC TGGGGCGGGC GTGGCGAGTG GACCCTGGCG
GGCTACCACA TCGTCAAGAA CAACCTGCTT GCGCGCTCTT CGGAAGATCC AGATCAGGTC
GTCCAAGTCG GGCAGCAATC GTCACGCGGT ATCGAAGCGT CGGTTGGCTT GGCGCTCGAC
CACGGTTGGC GGGTCGACGC CAACACCACC TTCCTGCAGG CGAAATACGA CGACTTCGTG
CAGTCAGTTA ATGACGTGGG CGTGAACTTC GCCGGCAACG TGCCGATCAA CGTGCCGCTC
AACGTCTCGA ACGCGTGGCT GACCTGGGCG TTTGCGGCCG GCTGGTCCGC CAATGCCGGC
GTGCAGGTGG TCGGCAAGCG CTTTGCCGAC GCCGCCAACA CGCTGGAGAT GCCGGGCTAC
ACGCTTGTCA ATGCCGGTCT GCAGTGGAAG CCGGACGCCG CCTCGACGCT ATCGCTGCGG
CTCTACAACA TCTTCGACAA GGTCTATGCG ACGTCGAGCT ATGTCGACAA CCAATGGCTG
CTGGGGCGGC CCCGCACCGC GGAGCTGTCT TACAACGTCA AGTTCTGA
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| Protein sequence | MSPSPTASGR NRRLLSSVAL TALLWPAAGH AQSAPRGLDP IVVEGQTARP SKPRAASSAA
GSSRTRRASA PASRPPAAPA AAPSAAVAAV PTFNLGTMAS TASRLGLTPL QTPASVDIIT
AQTIAERGQR DVLDAVTQNA TGITATPEPG NGGVVFSTRG FSGTGSVMTL YDGTRLYVGA
GTVTFPFDTW SAERIEVLRG PASVMYGEGA IGGAINVITK QPLDVQRNQA EVSLDTNLTR
RIAVDSGGPI NKDVSYRITA TGNMSDGWVD RDKTSNIAVS AAVKVKQTDH LTWTLSTAYG
DRHPSLYYGT PLVNGRLDES LRFKNYNVGD SSIRYQDSWT QLKSEWQVTD SITVRNALYY
LNSRRHWKSA EEYAFNPTTR QVDRSTYLEI FHDQQQIGDR MDATVRGHLF GLENTFVAGF
DVNRINFKHT NNSPYGGTSS VDPYNFDPGL FASPDLTRPG YSSVTNQYAV FAENRLQLTE
QLALIGGIRQ DQPTVERTDL RNPANNYTRS YSSTTWRAGA VYTPIQDLAF YGQYSTAVDP
VGGLVTASNA NAKFELATGK QVEIGVKQSF WGGRGEWTLA GYHIVKNNLL ARSSEDPDQV
VQVGQQSSRG IEASVGLALD HGWRVDANTT FLQAKYDDFV QSVNDVGVNF AGNVPINVPL
NVSNAWLTWA FAAGWSANAG VQVVGKRFAD AANTLEMPGY TLVNAGLQWK PDAASTLSLR
LYNIFDKVYA TSSYVDNQWL LGRPRTAELS YNVKF
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