| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4525 |
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| Symbol | |
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| ID | 3907502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 5398829 |
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| End bp | 5400718 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637881858 |
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| Product | hypothetical protein |
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| Protein accession | YP_483600 |
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| Protein GI | 86743200 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5650] Predicted integral membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.48378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGCA TGGCCATGTC CCCGGCGTCC CCCGTCCGCG TCAGCCCGGC CCGGGAGGAC
CCGGTCGTCG CGGGGGCAAG CCAGCTCATC GGTGGGCCGC CGGGTGAGCA CGCGGCCGTG
CCCGACCGGC GTGGTTGGCT GACCCCGCTG CGGGTGCTGA TGGCAATGGT CATCGTGGCC
GGGGTCCTCG GCTACACCCA GAAGATCAGT TGCCGGGACA CCCGGAACTG GACGCATGAG
CACCAGTACA CGGCGTTGTG CTACTCCGAC ATCGTCGCGT TGTACAGCCA GGAGGGGCTG
GTCGACGGGA AGATCCCCTA TCTGGACTAC CCGACGGAAT ATCCGCCGTT GATCGGCGCC
ACCATGCAGC TCGTCGCCTG GCCGGCCGGT CTCGCGAACG GACCGCGGGC GGTCTACCGG
GAGGAGAACG GCGAGCGCGT CTTCGACCAT TACACGATGG ACATGCGGTC GGCCGTCTTC
TACGACCTCA CCGCCCTGCT GTTCCTGATC GTGGCCTCGG TCGCGGTGTG CTGCACCGCG
CTGGCGGCCG GATCGAGGCG GATCTGGGAC GCCGCTCTGT TCGCGCTGGC GCCGACCCTC
GTGCTGCATC TGCTGACGAA CTGGGACATC ATCGCGGTGG CGTTCGCGGC GGGCGGCCTG
CTTGCCTGGT CCAGACGGGC TCCGAAGCTC GCCGGGATGC TAATCGGACT CGGCATCCTC
ACGAAGCTCT ATCCGGCCCT GTTCCTGCTA GGGTTGGCCT TTCTCTGCCT CCGGGCCGGG
AGGCTGCGCG AACTGGCCCG GACCGTCTGC GCGGCGGCGG TGACGGTGCT GGTGGTCATC
GTCCCGCTAT GGCTGACCGC CGGCTACTTC AACGCGGAGA ACGCCCGCGT CGGCGACAGC
ATCTGGTCGA CCTTCTGGCG AGGTGGTGAC TGGATCCGGC TGGTCGGTGG TGGTCCGGAC
GGGGCCCGCA ACGCCATCGC CCGGTTCTTC GATCTGAACT CCGACCGCGG CGCCGACTGG
GACTCGCTGG CGTTCGGCGC GACCTGGCTT GCCGGCCGCT ACGACCCGGC CTGGTTCGGA
GCACTGCACC TGGTGGTCTC CGCGCTCACT GCCGTCGTCC TCGTCGCGGT GGCCGCGGCC
GCGATCCATC ATCGGCCCGA TGCGCGCCGG CTGGTCATCG CGGCGGCCGC GGCCGGCTGG
GTGACGATCG TCGTCGCCCT CCCGATGATC CTGCAGGGCT TGCGGAACAA CGGCCTGCCC
ATCTCCACGT TGAACATCAT CACTGGGGCG GCCCTGCTGG TCTCGGTGGT CGCCATCGGG
TTACTCACCT GGCTCGCACC GCGCCGGCCC CGTCTGCCGC AGGTGCTGTT CCTGCTCGTC
GTCGCCTTCC TGCTGACCAA CAAGGTCTTC TCACCCCAGT ACACGATCTG GCTGCTACCG
CTGGCGGCAC TGGCTCGGCC CCGATGGAGG CTGTTCCTGC TGTGGCAGGT CTGCGAGGCG
TGGGTGCTGT TCACCCGATT CATGCACTTC ATCTACAACG ACACGCAGGG TCGTCACGGC
ATCGACCGGG GATGGTTCGT CGGCGCGGTG GCCCTGCGCG ACCTGGTGCT GCTCGTCCTG
GCCGGATTCG TCGTCCGGGA GATCCTGCAT CCGCATACCG ACATCGTGCG GACCGGCGGA
ATGGCGTACC CGGGTGATCC GCGTGTCGCG GTCGGCTCCG CTGCCGTCGG CGATCCGGAC
GCCGTTGACG ACCCTGCGGG CGGGGTGCTG GACCATGCCC CCGATGTCCG CGGCGGCCGG
CCGGCGTGGG TTACGGCGGC GGCCACCGGC GAGCCGGCCG GAGGCCCGGG CGCCGGCAGC
GCCGACGGGG CCGGGTCCGG CGGTGCATGA
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| Protein sequence | MTGMAMSPAS PVRVSPARED PVVAGASQLI GGPPGEHAAV PDRRGWLTPL RVLMAMVIVA
GVLGYTQKIS CRDTRNWTHE HQYTALCYSD IVALYSQEGL VDGKIPYLDY PTEYPPLIGA
TMQLVAWPAG LANGPRAVYR EENGERVFDH YTMDMRSAVF YDLTALLFLI VASVAVCCTA
LAAGSRRIWD AALFALAPTL VLHLLTNWDI IAVAFAAGGL LAWSRRAPKL AGMLIGLGIL
TKLYPALFLL GLAFLCLRAG RLRELARTVC AAAVTVLVVI VPLWLTAGYF NAENARVGDS
IWSTFWRGGD WIRLVGGGPD GARNAIARFF DLNSDRGADW DSLAFGATWL AGRYDPAWFG
ALHLVVSALT AVVLVAVAAA AIHHRPDARR LVIAAAAAGW VTIVVALPMI LQGLRNNGLP
ISTLNIITGA ALLVSVVAIG LLTWLAPRRP RLPQVLFLLV VAFLLTNKVF SPQYTIWLLP
LAALARPRWR LFLLWQVCEA WVLFTRFMHF IYNDTQGRHG IDRGWFVGAV ALRDLVLLVL
AGFVVREILH PHTDIVRTGG MAYPGDPRVA VGSAAVGDPD AVDDPAGGVL DHAPDVRGGR
PAWVTAAATG EPAGGPGAGS ADGAGSGGA
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