Gene Francci3_4499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4499 
Symbol 
ID3907475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5371023 
End bp5371490 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content70% 
IMG OID637881831 
Productcyclic nucleotide-binding domain-containing protein 
Protein accessionYP_483574 
Protein GI86743174 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTGG TTGAGGCACC GCTCGGCGAG GTCGGCGTCT TCGCCGGTAT GCACCCGGAC 
CACCTCGCCC TCCTCGCCGG GTGTGCCCGG CACGCCATCT TCCGCCCGGG CGACGTACTC
CTGCGGGAAG GCGACCCGGC CGACACCCTC TACGTCATCC GGCACGGCAC GGTCGCGATC
GAAACCTTCG TCCCGACCCG GGGTCTGGTC CCCATCGAGA CCGTCGGAGC CGGCAATGTG
GTGGGCTGGT CCTGGCTGTT CCCGCCGTAC CGGCTCCATT TCGACGCCCG TGCCCTCTCG
CTGGTCCGCG CCACCGCCAT CGACGGTGCC TGCCTACGCG GGAAGTTCTC CCAGGACCCG
GCGCTGGGCT ACGACGTGCT GTCCCACCTT GCGCAGGTGC TCATCGAGCG CTTGCAGGCC
ACCCGGTTGC GGCTGCTCGA TGTCTACGCA AACCCGGGCC AGGGCTGA
 
Protein sequence
MTLVEAPLGE VGVFAGMHPD HLALLAGCAR HAIFRPGDVL LREGDPADTL YVIRHGTVAI 
ETFVPTRGLV PIETVGAGNV VGWSWLFPPY RLHFDARALS LVRATAIDGA CLRGKFSQDP
ALGYDVLSHL AQVLIERLQA TRLRLLDVYA NPGQG