Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4396 |
Symbol | |
ID | 3907370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 5254166 |
End bp | 5254963 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637881727 |
Product | haloacid dehalogenase-like hydrolase, type 3 |
Protein accession | YP_483471 |
Protein GI | 86743071 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTATCC GCGTCGTCTA TACCGATCTT GACGGCACGA TGGTCGGTCC CAAGGGTTGT TTCTTCCGGG CGGAGGGGGG AGCGATCACG CTGGAGCCGG CTCGCGCGCT CGCCGAGCTG CACGACGCCG GCATTGCGCT GGTTCTGGTC AGCGGGCGTA CCCGTCCGCA GCTTCTCGAG GCCGCGGCGA TCTTCGGTGC GGACGGGTTC ATCGGGGAGC TCGGCGCGAT CGTCGGCTGG AACGAGGGGC GCGACAGCGA GATCCTGCGC GGCGCGATGC CGCCCGACTT CGACCAGGTA CCGGAGTACC TGCTCGACCG GATGGTCGAG CGCTACCCCG GGCGGCTGGA GCTGCACACC CCCTGGCACT CCGGCCGGGA GGTCGACGTC ATGCTTCGCG GGAAGATCGA CGTGTCGGAG GTCGACGGCT GGCTCACCGA GACCGGATTC TCCTGGTTGA GCATGCGTGA CAACGGGCTG ATCTCGCCGG TCCACATGCC TGATCTTGGG GTGAATCCGC ACGTCTACCA TCTGGTCCCG GACGGTGTGG GTAAGGGGGA CGCGGTCGCC TACGACCTCA AGCGGCGCGG GGTGTCACCG GCCGAGGCGA TCGCCATCGG CGATTCCGCC AGCGACCTGG CCATGGCTCC CCATGTCGGG CGGATGCACC TGGTCGCGAA CGCGGTGCGG CACCCGGACA TCGCCGCCCT GCTGACGCGG TACGACAACG TCACGGTCGA GGCGGGCCCG GTCGGCGCCG GCTGGGCCAG CGCGGTGCGA GCGGCCGCCG CCGTCTGA
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Protein sequence | MSIRVVYTDL DGTMVGPKGC FFRAEGGAIT LEPARALAEL HDAGIALVLV SGRTRPQLLE AAAIFGADGF IGELGAIVGW NEGRDSEILR GAMPPDFDQV PEYLLDRMVE RYPGRLELHT PWHSGREVDV MLRGKIDVSE VDGWLTETGF SWLSMRDNGL ISPVHMPDLG VNPHVYHLVP DGVGKGDAVA YDLKRRGVSP AEAIAIGDSA SDLAMAPHVG RMHLVANAVR HPDIAALLTR YDNVTVEAGP VGAGWASAVR AAAAV
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