| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4312 |
|---|
| Symbol | |
|---|
| ID | 3907281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 5151143 |
|---|
| End bp | 5152264 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637881640 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_483387 |
|---|
| Protein GI | 86742987 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5282] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR03624] putative hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.658784 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.614415 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACGCCG AGCTGGTCGA CTGGGAACTC GCCGTGACGA CGGCGAGGAA ACTGGTTCGC
CCCGGCCCGC AGATCTCGCG GGAGCAGGCC GGCGAGGTCG TCTCGGAGCT GCGGCGACTG
GCCGTCGAGG CCGAGCGGCA CGTCGAGGAC TACACCCGGC TCACTCCCGC CGGGCCGGCC
ACCCCCATCA CCGTGGTGGA CCGGCTGGAG TGGGTCCGCT CCAACGTCGC CGGTCTGCGG
GTGCTGACCT CCCCGTTGCT GGGCAAACTG TCCGAACAGC AGCGCGGCAA CCTCGCCGCG
GCGGTCGGTC GGCGGGTCAC CGGGGTCCAG ATCGGCACAG CCTTGGCCTA TCTGGCCGGC
AAGGTGCTGG GCCAGTACGA GGTCTTCCTC CCGCCGGAGG AGTACCAGGC CGGGAGGGAC
GATCCGGGTC CGCCCGACGT GCCGGGGTCG GTCGGGCGCC TCAGCCTGGT CGCGCCGAAC
ATCGCGCACG CCGAGGCGGC CATGGGGGTC GTGCCGCGAG ACTTCCGGAT GTGGGTATGC
CTGCACGAGC AGACCCATCG CAGTCAGTTC ACCGCCGTGC CGTGGCTGCG GACCCACCTG
GAGTCCGAGA TCACCGCGTT CATTGAGGCC ACGGACCTCG ATCCGGACGT CCTCGCGGAC
CGCGTCCGCT CGGCGATGAG CGCGCTGCGC GGGGCGGTGT TCGACCGGGA GGCCGACAGC
CCGAGCGTCG TGGAGGCGCT GCAGACCCCG GCCCAGCGAG CGGTTCTCGA CCGCCTCCAG
GCCATCATGA CGTTGTTGGA GGGCCACGCC GACCAGGTGA TGGACGCGGT GGGGCCGAAG
ATCGTACCCA CCGTCGCCGA CATCCGGACG AAGTTCGAGG GTCGCCGCGG CGGGGGATCG
CCGATCGACC GGTTCGTCCG CCGGCTCCTC GGTCTCGATC TCAAGCTGCA GCAGTACCGC
CAGGGCGGGG CGTTCGTGCG TGCGGTGGTC GCGCAGGCCG GGGTGACGGG TTTCAACACC
GTCTGGGAGT CACCGGCGGC GCTGCCGACC CGCGCCGAGC TGGTCGATCC CACCGCCTGG
ATGCAACGGG TCCTGGGCAG CCGCCCGCCG ATCTCGGCGT GA
|
|---|
| Protein sequence | MDAELVDWEL AVTTARKLVR PGPQISREQA GEVVSELRRL AVEAERHVED YTRLTPAGPA
TPITVVDRLE WVRSNVAGLR VLTSPLLGKL SEQQRGNLAA AVGRRVTGVQ IGTALAYLAG
KVLGQYEVFL PPEEYQAGRD DPGPPDVPGS VGRLSLVAPN IAHAEAAMGV VPRDFRMWVC
LHEQTHRSQF TAVPWLRTHL ESEITAFIEA TDLDPDVLAD RVRSAMSALR GAVFDREADS
PSVVEALQTP AQRAVLDRLQ AIMTLLEGHA DQVMDAVGPK IVPTVADIRT KFEGRRGGGS
PIDRFVRRLL GLDLKLQQYR QGGAFVRAVV AQAGVTGFNT VWESPAALPT RAELVDPTAW
MQRVLGSRPP ISA
|
|---|
| |