Gene Francci3_4310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4310 
Symbol 
ID3907279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5148512 
End bp5149051 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content66% 
IMG OID637881638 
Productinorganic diphosphatase 
Protein accessionYP_483385 
Protein GI86742985 
COG category[C] Energy production and conversion 
COG ID[COG0221] Inorganic pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.584318 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCTTG AGTTCGATGT GACCATCGAG ATCCCCAAGG GGCAGCGCAA CAAGTACGAG 
ATGGATCACC ACACCGGCCG TATCCGGCTT GACCGGATGC TGTTCACCTC CACCCACTAC
CCGTCGGACT ACGGGTTCAT CGAGGGAACC CTCGGGCGCG ACGGTGATCC GCTGGACGCC
CTCGTCCTGC TGGAGGAGCC GACGTTCCCG GGCTGCCTGG TGCGGTGCCG GACGATCGGC
ATGTTCGAGA TGACCGACGA GAAGGGGCCG GACGACAAGG TTCTCTGCGT GCCGGTGGCC
GACGTCCGGC AGGAGCACCT GCGGGATCTG CGGCACCTGC CGGAGTTCGA CCGGTTGGAG
ATCCAGCACT TCTTCGAGGT CTACAAGGAC CTCGAGCCCG GTAAGTCGGT GGAGGGCGCA
TCCTGGGTGG ACCGCAAGGA GGCTGAGCGG GAGATCCTGG CGTCCATCAA GCGGCTGCGC
GAGGCGGAGG CCGCGGAGGC GGACGGGCAC GACCAGGAGG CCGAACCCAG GTCGGCCTGA
 
Protein sequence
MDLEFDVTIE IPKGQRNKYE MDHHTGRIRL DRMLFTSTHY PSDYGFIEGT LGRDGDPLDA 
LVLLEEPTFP GCLVRCRTIG MFEMTDEKGP DDKVLCVPVA DVRQEHLRDL RHLPEFDRLE
IQHFFEVYKD LEPGKSVEGA SWVDRKEAER EILASIKRLR EAEAAEADGH DQEAEPRSA