| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4305 |
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| Symbol | |
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| ID | 3907273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 5139309 |
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| End bp | 5142458 |
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| Gene Length | 3150 bp |
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| Protein Length | 1049 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637881632 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_483380 |
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| Protein GI | 86742980 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCAGCGC GCACGAAGAC GACGACACGG GCGACCGCGC GGTCATCCGC ACCGGTCGCC
GAGCCCACCG AGGCCGGGCT CCCGCCGGAG ACCGGCTCGA GCGAGGCATC GGCCGACGTA
CCCGCCGGCG CCACCAGCCG GACGGCGAAC GGGCGAACGG AGGCTGGCCA TTCGGCGAAC
GGCTCAGGCG GAGCCACCGG CGCCCACGGC AGCCGCGCCA CCGGCTCCGG CCCGGGCAAC
CGCCTGGTGA TCGTGGAATC GCCGGCGAAG GCGAAGACGA TCGCCGGCTA TCTCGGTCCG
GGGTGGCAGG TCGAATCCAG TATCGGGCAC ATCCGTGACC TCCCGCGCAG TGCCGCCGAT
GTCCCGGCCG CGCACAAGGG CAAGCCGTGG GCTCGGCTCG GCGTCGACGT CGACAACGAC
TTCGAACCGC TCTACATCGT GACGCCGGAC AAGAAACCGC AGGTCAGCAA GCTCAAGGCG
CTCGTGAAAG ACGCCAGCGA GCTCTACCTC GCGACGGACG AGGACCGCGA GGGCGAGGCC
ATCGCCTGGC ATCTGCTCCA GACACTGAAG CCGACGGTGC CGGTCAAGCG GATGGTGTTC
CACGAGATCA CCCCCCAGGC GATCCAGCGG GCCGTCGACA ATCCGCGCGA TATCGACAAG
AACCTGGTCA ACGCTCAGGA AACGCGTCGC ATCCTGGACC GTCTCTACGG CTACGAGGTC
TCTCCCGTGC TGTGGAAGAA GGTCATGCCG AGGCTGTCGG CGGGCCGGGT CCAGAGCGTG
GCGACCCGCA TCCTGGTGGA GCGGGAACGT GCCCGGATGC GGTTCCACTC GGCGGAGTAC
TGGAACATCG AGGGCCTGTT CGGGGCGACC GTCGCCCGCC AGGCGTGGTC GGGCGCGGAC
GGCACACCGG GATCCGGGCC GGATGGACCC GGCGCCGGGT CCATCCGCGG CGACGGGGTC
GAGAAGACCC CGCTCCCGGC AACCCTGATC GCCCTGAACG GCAACCGGAT CGCGACGGGT
CGTGACTTCT CCCCGACGGG GCAGCTCGTC TCCTCCGGGG TGACGCGGCT GGACGAGGCC
ACCGCCCGGT CGCTGGCCGA GCGGCTCGCC GACGCCGCAT TCACGGTGCG CTCGGTGGAG
ACCAAGCCCT ACCGCCGTTC GCCGTACCCA CCGTTCATGA CCTCGACGTT GCAGCAGGAG
GCCGGCCGCA AACTGCGCTT CTCCAGCCAG CGCACGATGC AGGTGGCGCA GCGGCTGTAC
GAGAACGGCT ACATCACCTA CATGCGGACG GACTCGACGA ACCTGTCCAA GACCGCCCTG
ACCGCGGCCC GCGCGCAGGC GGCGAGCCTG TACGGGCCGG AGTACGTGCC GGCACGCCCC
CGCACGTACG CCAAGAAGGT CAAGAACGCG CAGGAGGCCC ACGAGGCCAT CCGACCCGCC
GGGGACCACT TCCGGACCCC GGGTGAGGTT CGTGGCGAGC TCGACGTCGA CTCCTACCGG
CTCTACGAGC TGATCTGGCA GCGGACGGTG GCCAGCCAGA TGGCGGACGC CCGCGGCACG
AGCGCCACGA TCCGGCTCGG CGCGACCTCG TCCGCTGGGG AGGACGCCGA GTTCTCGGCA
TCGGGGAAGG TCATCACCTT TCCCGGTTTC CTGCGCGCCT ACGTCGAGGG CGCCGACGAT
CCAGACGCGG AACTGGAGGA CCGGGAGCGG CGGCTGCCGG ACGTACGGCA GGGCGACCCA
CTGACCACCC GCTCGCTGAC CCCCCGCGGG CACACCACCA GTCCGCCGGC GCGCTTCACC
GAGGCCAGCC TGGTCAAGAC GCTCGAGGAG CTCGGGATCG GTCGGCCGTC CACCTACGCC
TCGATCATCG GCACCATCCA GGACCGCGGC TACGTGTGGA AGAAGGGCTC GGCCCTGGTG
CCGAGCTTCG TCGCGTTCGC CGTCGTCGGC CTGTTGGAGG ACCACTTCAC CCGGCTGGTC
GACTACCGGT TCACCGCGAC GATGGAGGAC GACCTCGACG ACATCGCCGC CGGCACGGCC
GCCTCGACCG ACTGGCTGAC CCGCTTCTAC TTCGGAACCG GCGACGGCAC CGACCCGGCC
GCCGACGGAC TGAAGCACCT GGTCAATGAG CGGCTCGGAG AGATCGACGC CCGCGAGGTG
AACTCGATCC CCCTCGGCGA GACCGACGAC GGCACCCTGC TGGTCGTCCG GGTGGGCCGC
TACGGCCCCT ACGTCCAGCA CGGGGAGCGC CGTGCCAGCG TGCCGGACGA TCTCGCACCG
GACGAACTCA CCGTCGACAA AGCGCTGGGG CTGCTGGCCG CGCCCAGTGG CGACCGGATG
CTGGGAATCG ACCCGGCGTC GGGGGCGACC ATCACGGCGA AGGCGGGTCG CTTCGGCCCC
TACGTCACCA CCGACACTGA CCCGCCGCGC ACGTCCAGTC TGCTGCGTGG CATGTCGTTG
GAGACGCTGA CCCTCGACGA CGCCGTGCGG TTGCTCACCC TTCCGCGCAT TCTGGGTGCG
GGGGATGACG GGGAGGAGGT CACCGCCCAG AATGGCCGCT ATGGCCCATA CGTGAAGAAG
GGTGCCGAAA GTCGGTCGTT GGAATCTGAG GATCAGTTGT TCACCGTGAC CCTGGACGAG
GCCTTGGCGC TGCTCTCCCA GCCCAAGGCC CGCGGTCGGC GCCAGGCCGC GCAGAGCCCG
CCGCTGCGCG AGCTCGGGAC CGACCCGGCC AGCGGCAAAC CGATGGTGGT GCGGGAGGGC
CGGTTCGGCC CCTACGTCAC CGACGGTGAG ACCAACGCCA GTCTGCGCAA GGGCGACACG
GTCGAAACGA TCACCGATGA GCGTGCCGCG GAGCTGCTGG CAGACCGTCG GGCCCGCGGA
CCGGCCACCG CGAAGCGTCC TGCCCGGGGC ACCGCGAAAG CCGGCACCGC CAAGACCGGC
CCGAAAACCA CCAAGGCCAA GCCGGATACG GCGAAGTCCG GCACCGCGAA GTCCGGCACC
GCGAAGACCG GCACCGCGAA GACCGGCACC GCGAAGACCG GCACCGCCAG GTCCAAGACC
GCCCGGACGG TGACGGACGA CGGCGGCGGC TCCGATGGCT CCGATGACTC CGGTAGCTCG
TCGTCCAGTG GCACCCGCCG GACGGACTGA
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| Protein sequence | MPARTKTTTR ATARSSAPVA EPTEAGLPPE TGSSEASADV PAGATSRTAN GRTEAGHSAN
GSGGATGAHG SRATGSGPGN RLVIVESPAK AKTIAGYLGP GWQVESSIGH IRDLPRSAAD
VPAAHKGKPW ARLGVDVDND FEPLYIVTPD KKPQVSKLKA LVKDASELYL ATDEDREGEA
IAWHLLQTLK PTVPVKRMVF HEITPQAIQR AVDNPRDIDK NLVNAQETRR ILDRLYGYEV
SPVLWKKVMP RLSAGRVQSV ATRILVERER ARMRFHSAEY WNIEGLFGAT VARQAWSGAD
GTPGSGPDGP GAGSIRGDGV EKTPLPATLI ALNGNRIATG RDFSPTGQLV SSGVTRLDEA
TARSLAERLA DAAFTVRSVE TKPYRRSPYP PFMTSTLQQE AGRKLRFSSQ RTMQVAQRLY
ENGYITYMRT DSTNLSKTAL TAARAQAASL YGPEYVPARP RTYAKKVKNA QEAHEAIRPA
GDHFRTPGEV RGELDVDSYR LYELIWQRTV ASQMADARGT SATIRLGATS SAGEDAEFSA
SGKVITFPGF LRAYVEGADD PDAELEDRER RLPDVRQGDP LTTRSLTPRG HTTSPPARFT
EASLVKTLEE LGIGRPSTYA SIIGTIQDRG YVWKKGSALV PSFVAFAVVG LLEDHFTRLV
DYRFTATMED DLDDIAAGTA ASTDWLTRFY FGTGDGTDPA ADGLKHLVNE RLGEIDAREV
NSIPLGETDD GTLLVVRVGR YGPYVQHGER RASVPDDLAP DELTVDKALG LLAAPSGDRM
LGIDPASGAT ITAKAGRFGP YVTTDTDPPR TSSLLRGMSL ETLTLDDAVR LLTLPRILGA
GDDGEEVTAQ NGRYGPYVKK GAESRSLESE DQLFTVTLDE ALALLSQPKA RGRRQAAQSP
PLRELGTDPA SGKPMVVREG RFGPYVTDGE TNASLRKGDT VETITDERAA ELLADRRARG
PATAKRPARG TAKAGTAKTG PKTTKAKPDT AKSGTAKSGT AKTGTAKTGT AKTGTARSKT
ARTVTDDGGG SDGSDDSGSS SSSGTRRTD
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