| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4298 |
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| Symbol | |
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| ID | 3907266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 5129080 |
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| End bp | 5130426 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637881625 |
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| Product | type II secretion system protein |
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| Protein accession | YP_483373 |
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| Protein GI | 86742973 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.273888 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTAC TCGAGCGCGT GGGGACCGTC CCGGCAACCA TCGCAGTCAC CCGGCCGAGG
ACCGGAACCA TGATCGGTTC AGGAATCGGC CTGGTCCTCG GTGCCGTCCT GCTCACGCTG
ACCTCCGGAC CGGTGGCTGC GGGCGTCATG GCCGTGCTGC TCTGCTGTCT CGCCCGGGCG
CGACGGCGGT CACTGGAGCG GCGCAGGCAG GTGGCGGTCC GCCAGTCCGC GGAAGACCTC
CTCGCCGCGT TCGCGGCCGA GCTCGACGCC GGCGCACCCC AGCTCGAGGC CCTACGCCGG
GCGGCGGGCG GCATCGACGA ACTCGTTGCG GCACCGGCGG GACGATCGGC GTGGCTGCCC
ATCGACCAGC TCGGTGCCGC GCTCGACCGG ACGGAGGAGC CCGGTGCGTT GTTGTGCCGC
AGTGAGGCGT CATCACTGCG GCAGCTCGGA GTCGCCTACC AGGTCTGCGC GGCCGTCGGC
GCAAGGCTGG CGCCCGTCGC GACGATGCTC GCGGCGGTCG CCCGCGCCGA CGCGGTGCGG
GCGGGCGAGC TGACCTCGGC ACTGGCCGGG CCCCGGTCAT CCGGACGGCT GGTGGCCTCG
CTTCCGCTGG CCGGAATCGT CCTGGGGTCG CTCGCGGGAG CAGCGCCGAT TGCGGTGCTG
CTGGGCACGC CGGCGGGGAT CGGATGCCTG CTCGTGGGCG GGCTCGCCGA CCTGGTCGGA
GTCCGCTGGC TTCGCCGCTT GGCGGACGGC GTGGAGCGAC GGGGAGAGCC GGTGGCCGTG
GATGCAACGG GCCTCGCGCC CCCGACCTCC GCCGTGGCGG GGCACAACCG GTTCCTCGCC
GACTTTCCCC TGGCCCTGGA CCTGATCGCG GCGTGTCTAC GCAGCGGGGA AACCATTATG
TCGGCGGCGC GGGCCGTCGG CGCCGCCACC GGTGGCGTGT TGGGCGCGGA ACTGTGCTCC
GTGGGCGATG CACTCGCGGC GGGCGCCACG GTGGGCGCCG CATGCGAGCG ACTGGTGGCC
GCGAGTCATG CTCCCCGACT CACCGACCGG TTGCCCGGAT GGGCTCGCCG CGGCCGCGTG
ACGCCGCCGT CCCGGCGGGC CAGGATGGTG CGGGCAGCGA TCATGGCGCT CGATCGCGCG
GAGATGTCCG GGGCGAAGCT CGCCGCCACT CTCACCCGAC TGGCCGATCG TGCCAGGGAC
GAAGCCCACG CGGAGAGCAT CGCCGCGGCT CGTCGGGCAG GTGTCCTGGC GGTCGCGCCC
CTGGGCCTGT GCTTCCTTCC CGCCTTTCTC CTGCTCGGAG TGGTCCCCAT GGTCCTCGGA
TCCGTCCCCG CGCTGTTGCC GGCCTGA
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| Protein sequence | MTVLERVGTV PATIAVTRPR TGTMIGSGIG LVLGAVLLTL TSGPVAAGVM AVLLCCLARA
RRRSLERRRQ VAVRQSAEDL LAAFAAELDA GAPQLEALRR AAGGIDELVA APAGRSAWLP
IDQLGAALDR TEEPGALLCR SEASSLRQLG VAYQVCAAVG ARLAPVATML AAVARADAVR
AGELTSALAG PRSSGRLVAS LPLAGIVLGS LAGAAPIAVL LGTPAGIGCL LVGGLADLVG
VRWLRRLADG VERRGEPVAV DATGLAPPTS AVAGHNRFLA DFPLALDLIA ACLRSGETIM
SAARAVGAAT GGVLGAELCS VGDALAAGAT VGAACERLVA ASHAPRLTDR LPGWARRGRV
TPPSRRARMV RAAIMALDRA EMSGAKLAAT LTRLADRARD EAHAESIAAA RRAGVLAVAP
LGLCFLPAFL LLGVVPMVLG SVPALLPA
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