Gene Francci3_4294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4294 
Symbol 
ID3907262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand- 
Start bp5124334 
End bp5125080 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content69% 
IMG OID637881621 
Producthypothetical protein 
Protein accessionYP_483369 
Protein GI86742969 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.121888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGGGG GACGGTCGGC CGGGAGGGTA TTGACGGTAT GGACCGGAGG GGGCCGGGGC 
GGATGGCCTC CGGTGGGGCC TCCCGGTCCG CCGCCGGTTC GGACCCTGTC GGATCAGGGT 
GCATGTCGGA TCAGGGTGCA TGTCGGATCA GGGTGCATGT CGGATCAGGG TGCATGTCGG 
ATCAGGGCGG TAGCGCGAAC TGTCCCGCCG TCCAGCACGG GCGGGTCGCC GCCAGAGGGA 
GGACCAGAAG TGTCGATCGC AGCCGGGAAG GCTCGGGACG GCCGTGAGCC GACGCTGGGT 
GAGCTGGTGG CTCTGGCCAC TCGCGATGTC TCGTTGTTGG TTCGTCAGGA GATCAACCTG 
GCCAAGGCCG AGCTTGCCCA GCAGGCGGTG TCGGCTGCGC TCGGAATCGG TTTTCTGGCG 
GTGGCGGCCG GCCTCGGGTT CTGCGCTCTG ATCGCCGTCA CGATCTTTCT GGGAGAGCTG 
TTCACCTGGG CCGGCATCGA GCGTTTCTGG TCCTATCTGC TGACGGCCGG TCTCTACCTC 
GTCGTCGCGG GGCTGCTGGC CCTGTTCGCG ATGGCGCGGT TGCGCAAGCT CTCCCCGCCC 
GAGCGGACCA TCCAGACCGT GCGCGACGAC ATCACCTGGC TACGTAATCC GACGACCGCC 
CCAGCCAGGT CAGCGGGTCC GGTCGGACCG GGAGACGCGG TCGAGTCGGC GGGTGCGGCC 
GCCCACCCGG GCCAGCGCGG GCACTGA
 
Protein sequence
MMGGRSAGRV LTVWTGGGRG GWPPVGPPGP PPVRTLSDQG ACRIRVHVGS GCMSDQGACR 
IRAVARTVPP SSTGGSPPEG GPEVSIAAGK ARDGREPTLG ELVALATRDV SLLVRQEINL 
AKAELAQQAV SAALGIGFLA VAAGLGFCAL IAVTIFLGEL FTWAGIERFW SYLLTAGLYL 
VVAGLLALFA MARLRKLSPP ERTIQTVRDD ITWLRNPTTA PARSAGPVGP GDAVESAGAA 
AHPGQRGH