Gene Francci3_4289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4289 
Symbol 
ID3907257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5120027 
End bp5120563 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content70% 
IMG OID637881616 
Productputative endonuclease III 
Protein accessionYP_483364 
Protein GI86742964 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCGCCC GTTATCGGAC CGCAGCTGGC TATGCGGGCG CGGACCGCGC CGAACTCGAG 
GACATGCTGC GGCCGACCGG GTTCTTCCGT GCCAAGGCGA ACTCGCTGAT CGGCATCGGC
GCGGCCCTGA CCGAACGCTT CGACGGTGAG GTTCCACGGT CGCTGGCGGC CCTGGTGACC
TTGCCGGGCG TCGGTCGCAA GACGGCGAAC GTCGTGCTCG GGCATGCGTT CGACATGCCC
GGAATCACCG TCGACACCCA CGTCGGGCGG CTGTCCCGCC GCTTTGGGCT GACCACTCAG
ACCGACCCCG TCAAGGTCGA GTCGGACCTG GCGGCGCTCA TCGAACAGCG GGACTGGACC
ATCGCCTCCG ATCGCATGAT CTTTCATGGG CGACGGATCT GTCACTCGCG CCGCCCGGCC
TGCGGCGCCT GCGGGCTGGC CCGGCTGTGC CCGTCCTTCG GGCTCGGCCC CACCGAGCCT
GCCGAGGCGG CCCGGCTGGT CCGGGGAACA CGCAGCGACG TCGAAACCCT GCGATGA
 
Protein sequence
MFARYRTAAG YAGADRAELE DMLRPTGFFR AKANSLIGIG AALTERFDGE VPRSLAALVT 
LPGVGRKTAN VVLGHAFDMP GITVDTHVGR LSRRFGLTTQ TDPVKVESDL AALIEQRDWT
IASDRMIFHG RRICHSRRPA CGACGLARLC PSFGLGPTEP AEAARLVRGT RSDVETLR