Gene Francci3_4278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4278 
Symbol 
ID3907246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5108960 
End bp5109316 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content70% 
IMG OID637881605 
Producttranscription factor WhiB 
Protein accessionYP_483353 
Protein GI86742953 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.212207 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGAA GCCTGACCTC CACCGTCAGC ACGCCACGCC GTGCCAACAC GACCCATCTC 
GTGGGTTCCG CCGTCGACGG CGACTGGACG GCTCACGCCG CCTGTCGCGA CCTCGACCCG
GATGAGCTGT TCGTCCAGGG CGCCGCCCAG AACCGGGTGA AGACCCGGTG CTTCGGCTGC
GCTGTCCGCA CCGAGTGCCT CGCGGACGCT CTCGACAACC ACGTCGAGTT CGGCGTCTGG
GGGGGCATGA CCGAACGGGA ACGTCGCGCG CTGCTACGTC GCCGCCCAGA CGTCACGTCC
TGGCGGAAGC TGCTCACGGA CGCCCAGGCC GACCACAGAT CGGCCTCCGC CGGCTGA
 
Protein sequence
MTRSLTSTVS TPRRANTTHL VGSAVDGDWT AHAACRDLDP DELFVQGAAQ NRVKTRCFGC 
AVRTECLADA LDNHVEFGVW GGMTERERRA LLRRRPDVTS WRKLLTDAQA DHRSASAG