Gene Francci3_4276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4276 
Symbol 
ID3907244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5105287 
End bp5105745 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content72% 
IMG OID637881603 
Producthypothetical protein 
Protein accessionYP_483351 
Protein GI86742951 
COG category[S] Function unknown 
COG ID[COG1610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0942523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCC TCAAGGAACG TCTGCGCGCC GATTTGACCG TCGCGATGAA GTCCCGTGAC 
GAGCTGCGGA CGTCCACTCT GCGGCTGGCC CTGGCCGCGG TGAAGGATGC GGAGGTGGCC
GGCAGCTCCG CGCGGGTCCT CGACGACCCG GAGGTCTCGA AGGTCCTGAC CCGCGAGGTG
AAGAAGCGCC GGGAGGCGGC CGACGCCTAC GCCGCGGCCG GTCGCGGCGA CCAGGCGGAC
CGAGAGCGGG CCGAGGGCGA GGTGCTCGAG GAGTACCTGC CGAAGCAGCT CGGCGACGAC
GAACTGGCCA CGATCATCGA CCAGGTACTC GCGGGTCTGG ATGTCAGCGG TCCACGAGCG
ATCGGTCCCG CCATGAAGTC CGTGCAGGCC GCGGTCGGCG GCCGGGCCGA CGGCGGCCGG
GTCGCCGCAC TCGTGAAGGC CCGGTTGGCG GGCGGCTGA
 
Protein sequence
MSTLKERLRA DLTVAMKSRD ELRTSTLRLA LAAVKDAEVA GSSARVLDDP EVSKVLTREV 
KKRREAADAY AAAGRGDQAD RERAEGEVLE EYLPKQLGDD ELATIIDQVL AGLDVSGPRA
IGPAMKSVQA AVGGRADGGR VAALVKARLA GG