| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4274 |
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| Symbol | |
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| ID | 3907241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 5102798 |
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| End bp | 5104021 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637881600 |
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| Product | phage integrase |
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| Protein accession | YP_483349 |
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| Protein GI | 86742949 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.173259 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAGT CGAAACAAAA GCGGACTCGC GCGAACGGTG AGGGATCGAT TTACCCGTAC
CGGAATGGCT TCGCCGCGTA CGTGTGGGTG ACCACACCTG ATGGGAAGTC ACGGCGGAAG
TACGTGTACG GGCAGACCAG GGAGATCGTT CACGAAAAGT GGATCAAACT ACACTCGACG
GCTCGACAGG GACCCATGCC GACACGATCG GTGACGGTGG CGGTATTCGT TGCTCGGTGG
CTGAGTGAGG TGGTGGAGCC GAACCTTGCT CCGCTGACGT ACTCGACATA CGAGACGCTG
GCGAGGCTGT ACATCGTTCC GGGTCTGGGT GCCAAGCGGC TCGACCGGCT GACGGTCCGG
GACGTACAGA AGTGGGTCAA CGGGCTTCAG CGGGCCTGCC AGTGCTGCGC ACAGGGCAAG
GATGCTCGGC GGCCGGAGAG GCGGCGTCGG TGCTGTGCGC TCGGCCGGTG CTGTGGGCAG
ACCATCTCCG CCCGGACACT GAAGGACGTT CGGGGCGTGC TGCGGTCCGC GTTGACGCAC
GCTGGTCGCG AGGAGTTGGT GTCCAAGAAC GTTGCCGGCC TGGTCAAGGT TCCGAAGGTC
AGGGCGCGAC GTCGGAAGGC GTGGACCACG GATGAGGCGC GGATCTTTCT GGAGTCGGCC
CGTGGTGATC GGTACTACGC CGCGTACGTC CTGATCGTCG TTCTCGGCTT CCGTAAGGGG
GAGGCGCTGG GGCTGCCGGA CGTGACCGAT GACGGGCCGG AGGAGTTGGC GGTGGAGTGG
CAGCTTCAAC GGGTCCGGGG GCAGCTTCTG CATCGAGAGA CGAAGACGGC GGGATCGGAC
GCCACGCTGC CCCTGCCGCA GATCTGCCGT ACGGCGATCG CTGAGAGGCG GAGGCTGCGG
GCGGAGGATC GGAAGGCTGC GGGGGCTGCC TGGCAAGAGT CAGGACTGTT CACCACGGGA
CGCTTCGGCA CCGCGGTGGA GCCTCGGACG TTCGACCGGG CGTTCGCTCT GCGGGTACAG
AAGGCGGGGG TGCCTCGGAT CACAGTGCAC GACGCCCGGC GGACCTGTGC GTCGCTGCTG
GTGGATCTCG ACGTGCACCC ACGGGTGATC ATGCGCATCC TGCGGCACGC GAACATCGAC
GTGACGATGG AGATCTACGC GCAAGCGTCG TCCACGGCCA CGCGGGAGGC GTTGAACCGG
CTAGGCGAAA GTCTTGATCG GTAG
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| Protein sequence | MNESKQKRTR ANGEGSIYPY RNGFAAYVWV TTPDGKSRRK YVYGQTREIV HEKWIKLHST
ARQGPMPTRS VTVAVFVARW LSEVVEPNLA PLTYSTYETL ARLYIVPGLG AKRLDRLTVR
DVQKWVNGLQ RACQCCAQGK DARRPERRRR CCALGRCCGQ TISARTLKDV RGVLRSALTH
AGREELVSKN VAGLVKVPKV RARRRKAWTT DEARIFLESA RGDRYYAAYV LIVVLGFRKG
EALGLPDVTD DGPEELAVEW QLQRVRGQLL HRETKTAGSD ATLPLPQICR TAIAERRRLR
AEDRKAAGAA WQESGLFTTG RFGTAVEPRT FDRAFALRVQ KAGVPRITVH DARRTCASLL
VDLDVHPRVI MRILRHANID VTMEIYAQAS STATREALNR LGESLDR
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