| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4230 |
|---|
| Symbol | |
|---|
| ID | 3907196 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 5045793 |
|---|
| End bp | 5047196 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637881556 |
|---|
| Product | cyclic nucleotide-binding domain-containing protein |
|---|
| Protein accession | YP_483305 |
|---|
| Protein GI | 86742905 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAC CCGTGCAGGC CGGTACGGAT GCCGGCGGCG AAGAGCCCCG GCTGAGTCTG
AGCACGGCGG CCGCGCGCAA TCTCGCGACG ACCACCAAGT CCGTTCCGCA GATGCAGGAG
ATCACCTCCC GGTGGCTGCT GCGGATACTG CCATGGGTCC AGGCGTCCGG CGGCGTGTAC
CGGGTCAACC GCCGTCTGAC CTACGTACTC GGGGACGGAC TCCTCACGTT CACGACCACC
GGATCCGAGG TCCGGGTCGT TCCGCGCGAA CTCGGCGAGC TGCCCGCCCT GCGGGGCTTC
GACGGCGAGG TGCTCGATGC GCTCGCGGAC CGCTTCGCCC AACGGGAATT CGCTGCCGGA
GACGTGCTGG TGGAGAGCGG TCAGGCCGCC GACCAGGTGT TCCTGATCGC GCACGGTAAG
GTCGGCAGGT TCGGCCTCGG AGAGTACGGC GACGAGCGGG AACTCGGCGT ACTCGCCGAC
GGCGAGTACT TCGGTGACGA GGCGCTGGTC GAGGAGGACC TGACCTGGGA GTTCACGGCC
CGCGCACTCA CCGGTACGAC GGCCCTCGTC CTGTCGCGCC AGCAGTTCTC CGAACTCGCC
GACTCCTCCG ACGAGCTGCG GCGTCACCTC GACGAGTACC GGACCCGGCT CCAGCCCCCG
AGCAACCGCC TGGGCGAAGC GGAGATCGCG ATCGCCGCCG GGCACACCGG GGAACCGGAC
CTGCCGGGGA CGTTCGTCGA CTACGAACTG GCCCCCCGCG AGTACGAGCT CAGCGTCGCC
CAGACCGTGC TACGCATCCA CAGCCGGGTG GCGGACCTCT ACAACGAACC GCACAACCAG
CTGGAGCACC AGATCCGGCT CACCGTCGAG GCCCTGCGCG AACGCCAGGA GCACGAACTG
GTGAACAACC CCGACTTCGG GCTGCTGCAC AACGCCGACC TCCGTCAGCG TATTCACACC
CGGAGCGGTC CGCCTACCCC GGATGATCTC GACGACCTGC TGAGCCGCCG ACGCAGCACA
CATTTCCTGC TCGCCCACCC GCGGACCATC GCCGCGTTCG GCCGGGAATG CACCGCCCGT
GGCATCTACC CGGCCACCGT CCTCCTCCAC GACCAGCACG TGCCGGCCTG GCGTGGCGTT
CCCCTGCTCC CGTTGAACAA GATTCCGATC AGCGGGACCG GTACCACGTC CATCCTCGCG
CTGCGCACCG GTGAGGAGAA CCAGGGGGTG ATCGGCCTGC ACCACGCCGG CCTGCCGGAC
GAATACGAGC CCGGCCTGTC CGTGAGATTC GCGGGTATCA GCGACAAGGC CATCATCTCG
TACCTGGTGA CCACGTACTA CTCCGCGGCG GTGCTCGTCC CCGACGCGCT CGGTATCCTG
GAGAACGTCG AGATCGGTCG GTGA
|
|---|
| Protein sequence | MTEPVQAGTD AGGEEPRLSL STAAARNLAT TTKSVPQMQE ITSRWLLRIL PWVQASGGVY
RVNRRLTYVL GDGLLTFTTT GSEVRVVPRE LGELPALRGF DGEVLDALAD RFAQREFAAG
DVLVESGQAA DQVFLIAHGK VGRFGLGEYG DERELGVLAD GEYFGDEALV EEDLTWEFTA
RALTGTTALV LSRQQFSELA DSSDELRRHL DEYRTRLQPP SNRLGEAEIA IAAGHTGEPD
LPGTFVDYEL APREYELSVA QTVLRIHSRV ADLYNEPHNQ LEHQIRLTVE ALRERQEHEL
VNNPDFGLLH NADLRQRIHT RSGPPTPDDL DDLLSRRRST HFLLAHPRTI AAFGRECTAR
GIYPATVLLH DQHVPAWRGV PLLPLNKIPI SGTGTTSILA LRTGEENQGV IGLHHAGLPD
EYEPGLSVRF AGISDKAIIS YLVTTYYSAA VLVPDALGIL ENVEIGR
|
|---|
| |