| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4198 |
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| Symbol | |
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| ID | 3907163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 5011160 |
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| End bp | 5013094 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637881526 |
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| Product | hypothetical protein |
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| Protein accession | YP_483275 |
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| Protein GI | 86742875 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1944] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00702] uncharacterized domain
[TIGR03604] bacteriocin biosynthesis docking scaffold, SagD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAGC CCTCCAAGGT CGCCTTCGCC CTTCCCATAC CGGCTCTTGT GCGGGTGCGC
GGAGCGATCG ACGAGGCCTG GCACGAGGCG CTCGCCGACC TTCCGGACGC TGTGGGCAGC
ACCGTGTCCC TGGGCATCGG GTGGGACCTC GCCTGGGAGC GCGAGCAGTG GCGATCGGCT
GTCGAGGACA GGCGCAGCCA CCTCTCCGTG CGCCTGTACG CGGACGAGAC TCTGATCGGC
CCCCTGTGGG CGCCCGCGAC CGATGCCGGA TGCAGCGGAT GCGCCGAGGT CCGCTCCCGG
GTGGTTCGCG CCCACCCGAT GGTCGAGGCA CTGCAAGTGC CCACCGAGGT CCCGCTTCCT
CGGTCTCCCC TGCTGCCAGA GCTGCTGGCG GCCGCCGTAC AACACCTCAC CGCCCAGCCT
CTCGGGCCCG GTGAGCTCTA CGCGGTCGGC ACCGGGTCAA CCCGCCGCCA CCGGGTTCCA
CGCAGCTCCG GCTGCCCTCT GTGCGGCGCC CGCACCACTG GCACCGCAAC CGCTCCCCCG
CCCGGCAGGC TGGTGCTGCA CGACCACCCG GCGGACCCTC ACGACCCCAC CCGGGGCCTC
ACGGGCCGCC GGTTGCTCGC CCCCGGCGCC CTGCGCCGTC GTACCGTCGA CCCGCGGTTC
GGCCCAGTAC GGGAAGTCGT CCGCGAGTCG CGCGCCCCCT ACGCGATGAG CATGGCGGCA
CTGCCCAACG CACCCGCCAT GGGATACGCG CGGGCCGTCG ACTTCGAAAC GGCCGAACCG
GTCGCGGTCC TGGAGGCTTA CGAGCGGCTG GGAGGCTTTC CGTACGAGGC TTCGGTGATC
GAGGACGTGG CCTACCAGGA GGTCGCAGAA CACGCCGTGG ATCCCGCCTC ACTCGGCGGG
TACACCGCGC AGCAACTGGC CCATCCGAGC ACTCGCGTGA CCCCGAGCTT CCCGTCCACG
CCCATGGACT GGGTCTGGGG CCACGACCTC GCCACCGGCA GACCCCTGCT TGTCCCCGCG
GACATCGGCT TCTACCAGTA CGACCACCGC TTCAAACGCT CGCACCATGC CGCGCAGCGA
GCCGCCCCGC ACGACCGTCG CCGCTATTTC CACGACTCGT CGAGTGGCTG CGCGCTGGGC
GGAAGCCTGG AAGAGGCGGC ACTGCACTCA CTGTTCGAAC TGGCCGAACG CGATGCCTTC
CTCATTGCCT GGCACTGTGC CGTCCCGCTG CCCGCCATCG ACCCGGCCTC CATCACCGAC
CCGGCCAGCC GTCGGTTGCT CGACCTGATC GACTCGCGGG GGTTCGACGC CCATCTGCTG
GTCGCCACCC AGGACATCGA CCTACCCGTG GTGTGGGCGC TCGCCATGAA CCGTGAGCGG
CACTTCCCGG CCACCTTCTC GGCCGCCGGG TCTGGCTGCA ATCCGGCGTC CGTGGTGCGC
AGTGCCCTGT GGGAGCTCGG CCAGATCGTC ACCGACCCGG TCACCTGGAC CAGAGCCGAC
ATCGAGCCCA TGCTCGCAGA CCCCTGGCTG GTCGAGGAAC TCGACGACCA CCTGCGGCTC
TACACCCTTC CTCAGACGCT CGGACGGGTC ACCCCGGTGC TTGGTGGTCT GCGGGTCCCT
CTCGACGAAG CGTTTCCCGG ATGGCCCGAC CGGCTGCGCG AGGAGGCGAA GGGCAGCGTG
CTCAGGGCGC TGCGAGCCAT GCAAGAACGT TTCGCCCGCG CCGGTCTGGA CCGGATCGTG
CTGGTCGACC AGTCCACCCG GGAACACCGG GACCTTCAGG TCGCCGTCGC CAAGGCGGTG
GTGCCGGGAA TCATCCCCAT GTGCTTCGGC CACGCGCAGC AGCGGCTGCT GGGCCTGCCC
CGGCTGACCG CAGCGCTCGC GGGCACGCCA ACGGCCGACC GGCCCTGCCC TTATGACCCT
CATCCGTTCC CGTGA
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| Protein sequence | MPEPSKVAFA LPIPALVRVR GAIDEAWHEA LADLPDAVGS TVSLGIGWDL AWEREQWRSA
VEDRRSHLSV RLYADETLIG PLWAPATDAG CSGCAEVRSR VVRAHPMVEA LQVPTEVPLP
RSPLLPELLA AAVQHLTAQP LGPGELYAVG TGSTRRHRVP RSSGCPLCGA RTTGTATAPP
PGRLVLHDHP ADPHDPTRGL TGRRLLAPGA LRRRTVDPRF GPVREVVRES RAPYAMSMAA
LPNAPAMGYA RAVDFETAEP VAVLEAYERL GGFPYEASVI EDVAYQEVAE HAVDPASLGG
YTAQQLAHPS TRVTPSFPST PMDWVWGHDL ATGRPLLVPA DIGFYQYDHR FKRSHHAAQR
AAPHDRRRYF HDSSSGCALG GSLEEAALHS LFELAERDAF LIAWHCAVPL PAIDPASITD
PASRRLLDLI DSRGFDAHLL VATQDIDLPV VWALAMNRER HFPATFSAAG SGCNPASVVR
SALWELGQIV TDPVTWTRAD IEPMLADPWL VEELDDHLRL YTLPQTLGRV TPVLGGLRVP
LDEAFPGWPD RLREEAKGSV LRALRAMQER FARAGLDRIV LVDQSTREHR DLQVAVAKAV
VPGIIPMCFG HAQQRLLGLP RLTAALAGTP TADRPCPYDP HPFP
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