Gene Francci3_4170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4170 
Symbol 
ID3907135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4973692 
End bp4974630 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content66% 
IMG OID637881498 
Producthypothetical protein 
Protein accessionYP_483247 
Protein GI86742847 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTAT CGAACACCGT TACGTCAGCT ACCTCTGATC AGGAAGCGGG GCAACGCCGT 
CCTGCCCGGT CCGACCGCTC TTTTGCCCGT CCGGTGCTGC CGCCGCTGCT GCCCGCCTCC
GACCTGGCGG CGGCGGTCAC CGCGTTTCAC TCTGCCGGGT CCGCCGCCCG CCGCTGGGAC
GTCGAATCGG CCTTCCGGTG GGACGAGGCC GAGGCCGACC GGCTCACCGA AGGCCAGCGC
TCAGCGGTCC GCTTCATCAC CCTGATCGAG GACCATCTCC CCGGCTATTT CGACCTCTAC
GAGCGTGCGT TCCCGCTCAA CTCCGACGTT GACCTGGAAA CCTTTATCCA TAACCGTGAG
CTCTACCATT TCACGGTACG GTGGGCCCAG GAAGAGGACA GCCACGCCCG GGCCCTGTTC
CGTTACCAGG TCGCCGCCGG TATCGCCGAA CCGGAGGAAC TGCGTCGGGA ACTGGCGGCT
GAGGGCCGTA AGAAATTCGA TCTGCCACTT GACCACGCGG TCTCGTTGTT CGCCTACGCA
CTCGTGCAGG AGAAGGCGAC GCAGCTCTAT TATCAGCAGC TACGCACCGT GGCCGGCGAT
CCGGTCCTGG CCGACGTCCT CACCCGACTC GCCCGCGACG AGTCGCGCCA CTTCGCGTTC
ATGGCGGATG TAGTCGAGCG GTACCTGCGC CGGGAGGGCG ACGCCGTGGT GGAGCCAATC
CGCGAGGTCA TTGCGACCTT CCGGATGCCA CTGGCCGACA CCATCCGCGG CTACTGGCGA
TGGGCACTGC GGATCCGGGA AGTCGCCCAC TACGACCACA CAGATGCCTA CGCTCACCTC
ATCCGGGTCG TGAACCGCGC CGTCAACGCC CGGTCCGACC GGGTGAATGA ACTGGTCACC
TTTATCGACG CATGCCGGAC CGCTCCCGTC CCGGCCTGA
 
Protein sequence
MTVSNTVTSA TSDQEAGQRR PARSDRSFAR PVLPPLLPAS DLAAAVTAFH SAGSAARRWD 
VESAFRWDEA EADRLTEGQR SAVRFITLIE DHLPGYFDLY ERAFPLNSDV DLETFIHNRE
LYHFTVRWAQ EEDSHARALF RYQVAAGIAE PEELRRELAA EGRKKFDLPL DHAVSLFAYA
LVQEKATQLY YQQLRTVAGD PVLADVLTRL ARDESRHFAF MADVVERYLR REGDAVVEPI
REVIATFRMP LADTIRGYWR WALRIREVAH YDHTDAYAHL IRVVNRAVNA RSDRVNELVT
FIDACRTAPV PA