Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4158 |
Symbol | |
ID | 3907123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 4959583 |
End bp | 4960794 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637881486 |
Product | XRE family transcriptional regulator |
Protein accession | YP_483235 |
Protein GI | 86742835 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0178123 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGAGA TCCGGGCTCT GGGCGACCGG GTCGCTCAAG TACGTGTACG CCGTTCGATG ACACAGACCG AGCTTGCCGA GCGTGCAGGC GTGTCTACCG ACCTGGTTAC GAAGCTGGAG CAGGGCCAGC GTGACGGCAT ACGCATCTCT ACGTTGCACA GCCTTGCTAG GGCCTTGGAC GTTCCTACCG CTACGTTCTT TGAGGTGGAG CAGGAGGAGA CGGTGAGCGA TAATGAGGCC TTCATACCGC TTCGGAAACT GTTGCTCCCT GGACCTTCCA GCGGGCAAAC CGACGAACCG GCCCTATCGC TCCAACCGTT GCGGCAACGT CTGGTGGCGC TGACCCAGGA CTACCATTAT GCGCGGTATC CGCAGGCCGT TCGGACCGCT CCAGAACTGA TCGAGGACAT CACTGCCGCC ACGGGCATAC ACCAGGAGGA GGACCAGAAG AGTATATATC GCCTGCTGGC GCACGCCTAC ATTATGGCTG CCTCGATTCT CATCCAGCTT AGCGGGGAGG ACTTGGCTTG CGAGGCCATA CGCCGGAGCA TGGAAGCGGC GGAGCAAGCC GGAGACCCGA TTCTCCGTGC AAGCGGAGTG GTGTACTACC GGTGGGCATT CATCCGCCAA GGCCGATTCG ACGATGCCGA AAAGGTGGCC GTCGACATGG CCACCGAGAT CGAGCCAAGC ATCATGTCAG CAACCCCCGA ACACCTTGCA GTATGGGGGA GACTGCTGAC CGGCGCCTCT GCCGCCGCAG CTCGGAACAA CCGTCCGGAA ACAGCGAAAG ACCTACTTTC GTATGCCCGT AGCTCAGCCG CGCGTGTAGC CGACGGAAAA ATGGACTACG CTAAGTACTG GGCGGCGTTC GGACCGAGTC AAGTCGACGC AATCGAGGTC GAAAATGCCA TGACGCAAGG CGATGCGCCC CGTGCATTGA CTCTGGCCCG GAGGGTCCGT CGGACTGAGA ACATGCCACT GAGCAACTGG ACACGTCACC TTCTCGCTGT GGCCGAGGCA CAAACGGCCA CAAGAGACTA CGCGAGTGCC ATTCAGACAG TTCAAGATGT CTACACTCTC ACCCCGGAAT GGCTACGGGA GCAGCGCCTA GCCAGCAGAC TAATACGCGA CCTACTAGAC GCTACGAGCG TCCGAAGAGC CCGAAAGACC GGTCTAGCCG ACCTGGCTAC ATTTGTGGGC ATCAAGCCGT AG
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Protein sequence | MTEIRALGDR VAQVRVRRSM TQTELAERAG VSTDLVTKLE QGQRDGIRIS TLHSLARALD VPTATFFEVE QEETVSDNEA FIPLRKLLLP GPSSGQTDEP ALSLQPLRQR LVALTQDYHY ARYPQAVRTA PELIEDITAA TGIHQEEDQK SIYRLLAHAY IMAASILIQL SGEDLACEAI RRSMEAAEQA GDPILRASGV VYYRWAFIRQ GRFDDAEKVA VDMATEIEPS IMSATPEHLA VWGRLLTGAS AAAARNNRPE TAKDLLSYAR SSAARVADGK MDYAKYWAAF GPSQVDAIEV ENAMTQGDAP RALTLARRVR RTENMPLSNW TRHLLAVAEA QTATRDYASA IQTVQDVYTL TPEWLREQRL ASRLIRDLLD ATSVRRARKT GLADLATFVG IKP
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