Gene Francci3_4109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4109 
Symbol 
ID3907073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4915117 
End bp4915500 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content71% 
IMG OID637881437 
ProductPilT protein-like 
Protein accessionYP_483186 
Protein GI86742786 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCG GCGTCCTCGA CACCAGTGTC CTGGTCGCCA CAGACGTCAC CCCCCTCCCC 
GGCGAGCTGG CCGTCAGCGT CATCAGCATC GCCGAACTCC AGTTCGGCAT CCTCGTCGCC
AGGACGCCCC AGGCCCGCGC GACCCGGCTC GCCCGCCTCA GCGCGATCCA ACGACGGTTC
GACCCGCTGC CCGTCGACGA CGCCGTCGCC GACAGCTACG GACGTCTCGC CGCCCGTGTC
GTCGAAGTCG GGCGCCAGCC ACGCGCACGC ACCATGGACC TGCTGATTGC GGCCACCGCC
CACGCCCACG GAGCCAGCAT CTACACCCGC AACGCCGCCG ACCTCGCCGG CCTGGAAGAC
CTCCTGAGGA TCGTCACGAT CTAG
 
Protein sequence
MTRGVLDTSV LVATDVTPLP GELAVSVISI AELQFGILVA RTPQARATRL ARLSAIQRRF 
DPLPVDDAVA DSYGRLAARV VEVGRQPRAR TMDLLIAATA HAHGASIYTR NAADLAGLED
LLRIVTI