Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4109 |
Symbol | |
ID | 3907073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 4915117 |
End bp | 4915500 |
Gene Length | 384 bp |
Protein Length | 127 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637881437 |
Product | PilT protein-like |
Protein accession | YP_483186 |
Protein GI | 86742786 |
COG category | [R] General function prediction only |
COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCGCG GCGTCCTCGA CACCAGTGTC CTGGTCGCCA CAGACGTCAC CCCCCTCCCC GGCGAGCTGG CCGTCAGCGT CATCAGCATC GCCGAACTCC AGTTCGGCAT CCTCGTCGCC AGGACGCCCC AGGCCCGCGC GACCCGGCTC GCCCGCCTCA GCGCGATCCA ACGACGGTTC GACCCGCTGC CCGTCGACGA CGCCGTCGCC GACAGCTACG GACGTCTCGC CGCCCGTGTC GTCGAAGTCG GGCGCCAGCC ACGCGCACGC ACCATGGACC TGCTGATTGC GGCCACCGCC CACGCCCACG GAGCCAGCAT CTACACCCGC AACGCCGCCG ACCTCGCCGG CCTGGAAGAC CTCCTGAGGA TCGTCACGAT CTAG
|
Protein sequence | MTRGVLDTSV LVATDVTPLP GELAVSVISI AELQFGILVA RTPQARATRL ARLSAIQRRF DPLPVDDAVA DSYGRLAARV VEVGRQPRAR TMDLLIAATA HAHGASIYTR NAADLAGLED LLRIVTI
|
| |