Gene Francci3_4090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4090 
Symbol 
ID3907054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4898272 
End bp4899783 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content69% 
IMG OID637881418 
Producttwin-arginine translocation pathway signal 
Protein accessionYP_483167 
Protein GI86742767 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACC AGGTAGACGA TTCTCGCTAC TGCCGGTGTG GCACGCGCCT TGCCCGGGAC 
AACGACCGGG GATCGTGTGG GCCCTGCCAG CGCCGGGCTC GGGAACGGGG CACGGCTGCG
CCGGAGGTGC CGGCCGGGTT CTGGACCGCC TCCGATCAGC TTCGGGACGC CCTTGATGAG
CGGCACATGG GCCGGGTGAT CGCGGCCTAC CGCAACCACC CTCATCACAC TGTTCTCCTG
TCTCAGGAGA TGGTGGCCGG GTGGATGGGC ATCACTCAGA CCCAGTTGAG CCGCATCGAG
TCGGGTGAGC CGGTGACCGA CCTTACGAAG CTCATCCGGT GGGCCGAGGT CCTGTGCATC
CCGGAAGACC TGCTGTGGTT CAAGCTCCCA CGGCCGCGCC CCAGCGAGGC ACCCCCTGCC
CCGGTTGGCT CTCCCACCGC ATCGGCGGTT CCCGGCATCC TCGGGGTACC GCTCACAGAC
AGCGCGGGTC CGCCGGCTGA CCCGTACCGG GTGATCGCAC ACGTAGGGGA GGTGGTCATC
GTGGCCATCG ACCGGCGCAC GTTTCTCGCG GGAAGCGGTG CCGGGTTCCT GGTCGGGGGC
GCGGTCATGC CCTTGGCGTC GTATCAGCAG GTTGCACCTG AGGCCATCGA GTATCTGGCG
GCTCAGCTTG ACGGCTACTA CCGGGCCGAG GCCGCGTTGG GGCCGCACAC CGTGATTCCG
TCGGTGCTGG TGCAGCAGGA ACTCATCCGG CAGTTCCTGC GTGTGGCCCG GGGCCCCGAA
CGGCACGCCC TGTTGCGCAC GAGCGTCGCC TACGCGGGCC TGATGACCTG GCTCTACCAG
GATGCCGGGG ACCTCGTGAG CGCGTCGCAC TGGGCGAACC AGGCTCTCGA ACTCGCCCAC
CGGGTGGGAG ACACCCAACT CGTCCGACAC GCCCTGACGA ACAAGGCGAT GATCTGTACC
GACCAGCAGG ATGGACCCGG CACCCTCGAT CTGACCAGCG CGGCCCTGAC GGACGGGAAC
GGCCTGTGCG CAAAGGTCCG GGTACAGGCG ATGCAGCAGA CCGCCCACGG CTACGCCCTC
ATCGGCGACC GGCGCGGCGC AGACTACGCC CTGGACAAGG CCGCGGCCCT GCTGGTCCGC
GTCGATGACG ACTACCCGTG GTTCAACGCC TGCCGGCGCA CCCCCGGCTA CATCGAGGTG
CAGCGGGCCA CCTGCTACAA CCGTCTCGGC CTCGGCCGCG AGGCCCTGCC ACTGTGGGAG
CAGGTCATCT CCGCCCTGCC CGCCACGGCC CGCCGGGACA AGGGCGTGTA CCAGGCACGG
CAAGCCACCT CGCATGCTCA GGCCGGGAAC CCGGAGGCCG CCGCCGACGC CGTGACGCAC
GCGGTCACCG TCGCCCGGGA GACCAGTTCG GCGCGGCTAC GGCAGGAGCT CCACGGAGTT
TGGCACCACC TCACGCCGTG GCATGACCAT GAGACCGGAC GACAGGTCAA AGCTCAACTG
GCGACGCTGT AG
 
Protein sequence
MSDQVDDSRY CRCGTRLARD NDRGSCGPCQ RRARERGTAA PEVPAGFWTA SDQLRDALDE 
RHMGRVIAAY RNHPHHTVLL SQEMVAGWMG ITQTQLSRIE SGEPVTDLTK LIRWAEVLCI
PEDLLWFKLP RPRPSEAPPA PVGSPTASAV PGILGVPLTD SAGPPADPYR VIAHVGEVVI
VAIDRRTFLA GSGAGFLVGG AVMPLASYQQ VAPEAIEYLA AQLDGYYRAE AALGPHTVIP
SVLVQQELIR QFLRVARGPE RHALLRTSVA YAGLMTWLYQ DAGDLVSASH WANQALELAH
RVGDTQLVRH ALTNKAMICT DQQDGPGTLD LTSAALTDGN GLCAKVRVQA MQQTAHGYAL
IGDRRGADYA LDKAAALLVR VDDDYPWFNA CRRTPGYIEV QRATCYNRLG LGREALPLWE
QVISALPATA RRDKGVYQAR QATSHAQAGN PEAAADAVTH AVTVARETSS ARLRQELHGV
WHHLTPWHDH ETGRQVKAQL ATL