| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4090 |
|---|
| Symbol | |
|---|
| ID | 3907054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 4898272 |
|---|
| End bp | 4899783 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637881418 |
|---|
| Product | twin-arginine translocation pathway signal |
|---|
| Protein accession | YP_483167 |
|---|
| Protein GI | 86742767 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACC AGGTAGACGA TTCTCGCTAC TGCCGGTGTG GCACGCGCCT TGCCCGGGAC
AACGACCGGG GATCGTGTGG GCCCTGCCAG CGCCGGGCTC GGGAACGGGG CACGGCTGCG
CCGGAGGTGC CGGCCGGGTT CTGGACCGCC TCCGATCAGC TTCGGGACGC CCTTGATGAG
CGGCACATGG GCCGGGTGAT CGCGGCCTAC CGCAACCACC CTCATCACAC TGTTCTCCTG
TCTCAGGAGA TGGTGGCCGG GTGGATGGGC ATCACTCAGA CCCAGTTGAG CCGCATCGAG
TCGGGTGAGC CGGTGACCGA CCTTACGAAG CTCATCCGGT GGGCCGAGGT CCTGTGCATC
CCGGAAGACC TGCTGTGGTT CAAGCTCCCA CGGCCGCGCC CCAGCGAGGC ACCCCCTGCC
CCGGTTGGCT CTCCCACCGC ATCGGCGGTT CCCGGCATCC TCGGGGTACC GCTCACAGAC
AGCGCGGGTC CGCCGGCTGA CCCGTACCGG GTGATCGCAC ACGTAGGGGA GGTGGTCATC
GTGGCCATCG ACCGGCGCAC GTTTCTCGCG GGAAGCGGTG CCGGGTTCCT GGTCGGGGGC
GCGGTCATGC CCTTGGCGTC GTATCAGCAG GTTGCACCTG AGGCCATCGA GTATCTGGCG
GCTCAGCTTG ACGGCTACTA CCGGGCCGAG GCCGCGTTGG GGCCGCACAC CGTGATTCCG
TCGGTGCTGG TGCAGCAGGA ACTCATCCGG CAGTTCCTGC GTGTGGCCCG GGGCCCCGAA
CGGCACGCCC TGTTGCGCAC GAGCGTCGCC TACGCGGGCC TGATGACCTG GCTCTACCAG
GATGCCGGGG ACCTCGTGAG CGCGTCGCAC TGGGCGAACC AGGCTCTCGA ACTCGCCCAC
CGGGTGGGAG ACACCCAACT CGTCCGACAC GCCCTGACGA ACAAGGCGAT GATCTGTACC
GACCAGCAGG ATGGACCCGG CACCCTCGAT CTGACCAGCG CGGCCCTGAC GGACGGGAAC
GGCCTGTGCG CAAAGGTCCG GGTACAGGCG ATGCAGCAGA CCGCCCACGG CTACGCCCTC
ATCGGCGACC GGCGCGGCGC AGACTACGCC CTGGACAAGG CCGCGGCCCT GCTGGTCCGC
GTCGATGACG ACTACCCGTG GTTCAACGCC TGCCGGCGCA CCCCCGGCTA CATCGAGGTG
CAGCGGGCCA CCTGCTACAA CCGTCTCGGC CTCGGCCGCG AGGCCCTGCC ACTGTGGGAG
CAGGTCATCT CCGCCCTGCC CGCCACGGCC CGCCGGGACA AGGGCGTGTA CCAGGCACGG
CAAGCCACCT CGCATGCTCA GGCCGGGAAC CCGGAGGCCG CCGCCGACGC CGTGACGCAC
GCGGTCACCG TCGCCCGGGA GACCAGTTCG GCGCGGCTAC GGCAGGAGCT CCACGGAGTT
TGGCACCACC TCACGCCGTG GCATGACCAT GAGACCGGAC GACAGGTCAA AGCTCAACTG
GCGACGCTGT AG
|
|---|
| Protein sequence | MSDQVDDSRY CRCGTRLARD NDRGSCGPCQ RRARERGTAA PEVPAGFWTA SDQLRDALDE
RHMGRVIAAY RNHPHHTVLL SQEMVAGWMG ITQTQLSRIE SGEPVTDLTK LIRWAEVLCI
PEDLLWFKLP RPRPSEAPPA PVGSPTASAV PGILGVPLTD SAGPPADPYR VIAHVGEVVI
VAIDRRTFLA GSGAGFLVGG AVMPLASYQQ VAPEAIEYLA AQLDGYYRAE AALGPHTVIP
SVLVQQELIR QFLRVARGPE RHALLRTSVA YAGLMTWLYQ DAGDLVSASH WANQALELAH
RVGDTQLVRH ALTNKAMICT DQQDGPGTLD LTSAALTDGN GLCAKVRVQA MQQTAHGYAL
IGDRRGADYA LDKAAALLVR VDDDYPWFNA CRRTPGYIEV QRATCYNRLG LGREALPLWE
QVISALPATA RRDKGVYQAR QATSHAQAGN PEAAADAVTH AVTVARETSS ARLRQELHGV
WHHLTPWHDH ETGRQVKAQL ATL
|
|---|
| |