| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4060 |
|---|
| Symbol | |
|---|
| ID | 3907021 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 4856346 |
|---|
| End bp | 4858697 |
|---|
| Gene Length | 2352 bp |
|---|
| Protein Length | 783 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637881389 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_483139 |
|---|
| Protein GI | 86742739 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTTACTC CGCTCGTGGC GCTCGTGACG CGCCGCCCGC GTCTGGTCCT CGTCCTTACG
CTCCTCGTGC TGCTCGGCGC CGGTGGGCTC GCGGGCGGTG CCTTCGGCAA ACTCCAGACG
GGGGGGTTCG ACGATCCAGC GTCGGACTCC TCCCGAGCCG AGGACGTCCT GGACGCCCGC
TTCCACGGCC GCCCGAACCT CCTCCTGTTG GTGACCGCCC GGGCGGGCGA TGTCGACGAC
GCGGCGGTCG TCGCCGCGGG GAAGGAGGTT GCGGCCGATC TCGCCGCCCA GGCCGGGGCG
AGGGACGTCG TGTCCTACTG GACGGGGGGC GGTCCGGCGC TGCGCTCGCG GGACGGTCGG
CAGGCGCTCG TCGTCGCCAG TGTCCAGGAC GATGACCAGG CCGCCGACAT CGTTGATCAT
TATGGGTCGT GGGCGGACGC GCCGGGGGCG GTGACGGTCC GACCGGGTGG GGCCGCGACG
GTCGGGGAGG ACATCAGCGG ACACGTCTCG GCCGACCTCG CCGCCGCCGA GTCGTTCGCC
ATTCCCATCA CGTTGGCGTT GCTGGTCATC GCGTTCGCGG GCGTGGTCGC CGCCCTGCTG
CCGCTGGGTA TCGGGCTGCT CGGCATGCTG GGTGGCTTCG CCGCGCTTTC GGTGATCGGT
GAGCTTACCG ACGTGTCGAT CTTCGCGGTG AACCTGGCGA CGGCCCTCGG CCTGGGGCTG
GGCATCGACT ACTCGTTGCT GATGGTCAGC CGGTTCCGGG AGGAACTGGC GGCGGGTCGG
GACCGCGCCA CCGCGGTGGA GGGGACGGTC CGCTCGGCCG GCCGGACGAT CCTGTTCAGT
GGGGCGACGG TGATCGTGGC ATTGGCCGTG ATGCTCGTCT TCCCGCCGTT CTTCCTGAAG
TCGATGAGCT ACGCCGGGAT CTCGGTGACC CTCGTCGCGA TGCTGGCCGC CGTCGTGGCC
CTGCCGGCGC TGCTGATGGT GCTCGGCGAG CGGGTCAACG CCTGGGGGAT CGGCGGTCTG
CTCGGGCTCG TGCGGCGTCG CCGCGCCGGT CGTGCCCGGG GCGGCGAGGC GATCGGGCCC
GCGGGCGCGG CGGGGTCGGC GCCGGTCGGG TCGGCGCCGG TCGGGTCGGC GCCGGTCGTG
GTGCGGGAGG CGGCCGACTC GCCGTTCTGG CGTCAGGTCG CCGGCACCGT GATGCGCCAC
CCCGTGCTCA CCGGCCTGCC GGTGATCGCG GTTCTGCTCG TCCTCGGGGC GCCCTTTCTG
CACGTGAACT TCGGCACCCC GGACGACCGG GTGCTGAAGC CGGGCTCGGC GGACAGCCGG
ATCGTCGGTG ACGCCCTGCG GGGCGCGTTC GCCGCCGACA TCGGCGGCGC GCTCGACGTC
GTCGTCCAAG CCACCGGGCC GGGCATGATC GACCGGTCCG CGCTCGCCTC CTACGCGACC
GCGCTGTCCG AACTGCCGGA CGTGGCCCGG GTCGACAGCG CCCTCGGGTC CCACATCGAC
GGGCGCCGGG TCGTACCGCC CGGTCCGGCC AGCCGCCGGT TCGCGATCGC CGGAGCGGAT
TCCCTCCAGG TCGTACCTGC GGTGGACTAT GCGTCGGACC ATGCGCAGGC CCTCGTCCGG
GCCGCGCGTG CGGTGCCGGC GCCCGTGGGG ACCAGCGTGC TGATCGGTGG CGCATCCGCC
GTCCTGGTAG ACGGCAAGAC CACGATCGCC GACCGTCTCC CGGTCGCCCT CGGGCTGATC
GCGCTGGCGA CCTTCGTGCT GCTGTTCCTG TTCACCGGCA GCGTGCTGCT ACCGGTGAAG
GCCATCGTGC TCAACGGGCT GGCGATGTGC GCCGTGTTCG GCGCCTCAGT GTGGATCTTC
AGTGACGGCC ACCTGTCCGG GTTCCTCGAC TTCACCCCAG GCCCGCTGGA CACCTCCATG
CCGGTCCTGC TCTTCTGTAT CGCCTTCGGG CTCTCGATGG ACTACGAGGT CTTCCTGCTC
TCCCGGATCA AGGAGGCGCA CGACGCCGGC GCGCCCAACA CCGAGGCGGT CGCCACCGGG
CTCGCCCGGG TCGGGCGGAT CGTCAGCACC GCCGCCGCGC TGCTCGCCGT CACCTTCGTC
GCGTTCGGTA CCTCGTCGGT CCGGTTCATC CAGATGTTCG GGATCGCCAC CGCGCTCGCG
ATCGTGCTCG ATGCCACCCT CATCCGCGGG GTGCTGGTCC CCGCCTTCAT GCGGGTGGCC
GGCGACTACA ACTGGTGGGC CCCTGGCCCC TTGCGGACTT TGTATCGGCG GTTCGGACTA
CGCGAATACT CCGTCCCGGA GCAGGGCGGG GTCAGAACCG TTCAAAGCCG CGCCGGCGCT
CCCAGTCGGT GA
|
|---|
| Protein sequence | MFTPLVALVT RRPRLVLVLT LLVLLGAGGL AGGAFGKLQT GGFDDPASDS SRAEDVLDAR
FHGRPNLLLL VTARAGDVDD AAVVAAGKEV AADLAAQAGA RDVVSYWTGG GPALRSRDGR
QALVVASVQD DDQAADIVDH YGSWADAPGA VTVRPGGAAT VGEDISGHVS ADLAAAESFA
IPITLALLVI AFAGVVAALL PLGIGLLGML GGFAALSVIG ELTDVSIFAV NLATALGLGL
GIDYSLLMVS RFREELAAGR DRATAVEGTV RSAGRTILFS GATVIVALAV MLVFPPFFLK
SMSYAGISVT LVAMLAAVVA LPALLMVLGE RVNAWGIGGL LGLVRRRRAG RARGGEAIGP
AGAAGSAPVG SAPVGSAPVV VREAADSPFW RQVAGTVMRH PVLTGLPVIA VLLVLGAPFL
HVNFGTPDDR VLKPGSADSR IVGDALRGAF AADIGGALDV VVQATGPGMI DRSALASYAT
ALSELPDVAR VDSALGSHID GRRVVPPGPA SRRFAIAGAD SLQVVPAVDY ASDHAQALVR
AARAVPAPVG TSVLIGGASA VLVDGKTTIA DRLPVALGLI ALATFVLLFL FTGSVLLPVK
AIVLNGLAMC AVFGASVWIF SDGHLSGFLD FTPGPLDTSM PVLLFCIAFG LSMDYEVFLL
SRIKEAHDAG APNTEAVATG LARVGRIVST AAALLAVTFV AFGTSSVRFI QMFGIATALA
IVLDATLIRG VLVPAFMRVA GDYNWWAPGP LRTLYRRFGL REYSVPEQGG VRTVQSRAGA
PSR
|
|---|
| |