Gene Francci3_4031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4031 
Symbol 
ID3906992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4817563 
End bp4817991 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content66% 
IMG OID637881360 
ProductPilT protein-like 
Protein accessionYP_483110 
Protein GI86742710 
COG category[R] General function prediction only 
COG ID[COG2402] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATAGTTA TCGACACCGG TGTACTCGTC GCTGCCATCA ACAAGCGGGA CAAGTTCCAT 
GAATCGTGTG CCCACCTCCT CGTGGCGGCC GCCGAGCCCC TGGTAGTTCC CGCGATGGTC
ATCACCGAGG TTTGTTACCT GCTTGCGCGC CGGGGGCACG GAACGCCGCA ACTGGCCGCC
ACGTTCTTGG AGTCACTGGC GGCCGGAGAG CTTGACGTGG AGGCGCCGAC AGCCGCGGAC
CTCGACCGCG CTGCCCAACT GGTGCGGCGC TATGCCGATC TTCCGCTCGA CGCAGTCGAC
GCCGCGGTAG TCGCTACAGC GGAACGCCTG GGCACACCCA AGGTCGCGAC GGTCGACCGC
AAGGACTTCC AGATCGTCGT TCCCAGCCAC TGCGGCGCCT TTGAGCTTCT GCCTACGACC
CTCGGCTGA
 
Protein sequence
MIVIDTGVLV AAINKRDKFH ESCAHLLVAA AEPLVVPAMV ITEVCYLLAR RGHGTPQLAA 
TFLESLAAGE LDVEAPTAAD LDRAAQLVRR YADLPLDAVD AAVVATAERL GTPKVATVDR
KDFQIVVPSH CGAFELLPTT LG