Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4008 |
Symbol | |
ID | 3906969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 4791380 |
End bp | 4791796 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637881337 |
Product | putative IS1648 transposase |
Protein accession | YP_483087 |
Protein GI | 86742687 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCGTG GTGATCTGAC CGATGGTGAA TGGGAGTTGA TCGAGCCGCA CCTCCCGCTG GGGGCGTCCG GACCGATCCC TGACCTGCGC AGCTATTTCA ACGCGGTGAT GTGGAGGTTC CGTACCGGCA GCCCCTGGCG GGACGTGCCG AACAGCTACG GCTCCTGGTC GACGATCTAC GACCGGTTCC GCATGTGGGC GCGGGACGGG GTCTTCCAGA CCCTCATGGA CGCAATGATC ACCGAGGCGG CGGCGCGCGA CGATGTCGAT CTCAGCCTGG TCAGCGTGGA CTCCACCATC GCCCGCGCGC ATCACCACGC GGCGGGCATG GCGGTCGACC CGGACCTCCT GGAGGACATA GAGAAGGCCC TGACGGAGGA AAAGGGGCTT CAGAAACCGG GCAAAACGAC TCCGTAA
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Protein sequence | MTRGDLTDGE WELIEPHLPL GASGPIPDLR SYFNAVMWRF RTGSPWRDVP NSYGSWSTIY DRFRMWARDG VFQTLMDAMI TEAAARDDVD LSLVSVDSTI ARAHHHAAGM AVDPDLLEDI EKALTEEKGL QKPGKTTP
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