Gene Francci3_3992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3992 
Symbol 
ID3906953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4776891 
End bp4777640 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content69% 
IMG OID637881321 
Productputative regulatory protein 
Protein accessionYP_483071 
Protein GI86742671 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGAGAC CGCCGCGACG ATGTCCTGGG ACTCGGGGCC AGGGGGGGAT CGCTCAGCGT 
TATTACCTGC TCGCTCTTCG ATCGGCCAAG GCGGCTGACG ATCCTGTGTT CTGCGCGAAC
ATCCTCGCTG GCATGGCGCG GCAGCAGTTC TATCTCGGCC GGACGACCGA AGGACTTGAG
CTCGTCCGCC TCGCGCAGGA CGTCGCTGGT GCTCGGGCGA CTCCGGCGGT GCGTGCGATG
CTGTTCACGC GCGAGGCATG GGCCTACGCC CAGCAAGGTC GACTCTCCGC CTTCCGGCGC
GTGACAGGCC GGGCGCAGGA CGCTCTCCGC GACGTCGACC CGGGCGTTGA ACCGCACTGG
ATCTCCTACT TCGACCAGGC GGAACTGGCC GGCGTCACCG GAGGTCGTCT CCTCGACGTC
GCGCACCAGG CGCCCGAGTA TGCCGACGAG GCAGCCACCT GGTTGAGCCA GGCCGTCCGG
GCTCGGGGCG TCGGCAGCGT CCGCAGTACC GCTCTTGATC AGCTCGGGCA CGCCGAGATC
AGACTGGTGC AGGGCGAGTT CGACGAAGCA GCACGGCTGG GTCACGCCGC CGTGACGACG
GTCGAGCAGA CCCGGTCCAG CCGCGTCCGG GTCAAACTCG GCCAGTTCTA CCGGCACGCC
GAGACCAGGA CATCCGCCCG CCCCATCGCC GAGCTGTGCG GGAGGATCAA ACCCATGCTT
CGCGCCGAAG ACACGGCGGC CCGGATATGA
 
Protein sequence
MLRPPRRCPG TRGQGGIAQR YYLLALRSAK AADDPVFCAN ILAGMARQQF YLGRTTEGLE 
LVRLAQDVAG ARATPAVRAM LFTREAWAYA QQGRLSAFRR VTGRAQDALR DVDPGVEPHW
ISYFDQAELA GVTGGRLLDV AHQAPEYADE AATWLSQAVR ARGVGSVRST ALDQLGHAEI
RLVQGEFDEA ARLGHAAVTT VEQTRSSRVR VKLGQFYRHA ETRTSARPIA ELCGRIKPML
RAEDTAARI