Gene Francci3_3974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3974 
Symbol 
ID3906934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4755618 
End bp4756433 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content73% 
IMG OID637881302 
Producthypothetical protein 
Protein accessionYP_483053 
Protein GI86742653 
COG category[S] Function unknown 
COG ID[COG3544] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGA CGGACGACAA CCGGCCAGCC GGCAACGACC CGCCGGCCAG CGATGGCGAT 
GCGGCGCGCG GGAGTGACGC GCGGCCGCGG CGCCGCTGGG CCCGAAGCCG GCTGTGGTGG
ACGCCGATGG TGCTCGCCGT GCTGGCCGGC CTGCTGGCGG CCGGCGCGGC GCTGGGCAAC
CTCGCCAGCC GGTCACCGGA CGAGGGGTCG GTCGATGTCG GCTTCGCCCG GGACATGTCC
GAGCATCACG CCCAGGCCGT GCAGATGGCC ATGATCGAGT TCAGTCACGG CGGTGACCAG
GACACCCGCA GCGTGGCCCA GGACATCGCG CTGACCCAGC AACGCGAGAT CGGCATCATG
TCCTCATGGC TGTCCGGATG GGGGCGGCCC CAGTCCACCT CCGGGACACC GATGCGGTGG
ATGCGGGACT CCCGCACCGT CAACGGCGCC TCGGGCGGGC ATGACGGTCA TGCCGGGCCT
GGCGCCGCCA TGCCCGGCAT GGACCTGCCG GGCCTGGCCG GGGGTGCGGC GCAGGACGCG
TCCAGCGACC CGCGGGACAC CGCGCGCATG CCGGGCATGG CGACCCCCGC CGAACTGCAA
CGGCTGGCCT CGATCCGGGG CCATGACCTC GACGTCCTCT TCCTTACCCT GATGGTGCAC
CACCATCAGG GGGGGCTGGC CATGGCCCAG TACGCGGCGA TGCACGCCGG TGAGGACCGG
GTACGGGCGA TGGCCAGGGC GATGGTGCTC GCCCAGTCAA TGGAGATCGA CCAGATGCAG
CGCGATCTGG TACGCCTCGG CGCGCCTCGG GCCTGA
 
Protein sequence
MTTTDDNRPA GNDPPASDGD AARGSDARPR RRWARSRLWW TPMVLAVLAG LLAAGAALGN 
LASRSPDEGS VDVGFARDMS EHHAQAVQMA MIEFSHGGDQ DTRSVAQDIA LTQQREIGIM
SSWLSGWGRP QSTSGTPMRW MRDSRTVNGA SGGHDGHAGP GAAMPGMDLP GLAGGAAQDA
SSDPRDTARM PGMATPAELQ RLASIRGHDL DVLFLTLMVH HHQGGLAMAQ YAAMHAGEDR
VRAMARAMVL AQSMEIDQMQ RDLVRLGAPR A