| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3969 |
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| Symbol | |
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| ID | 3906929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 4748950 |
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| End bp | 4750659 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637881297 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_483048 |
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| Protein GI | 86742648 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1928] Dolichyl-phosphate-mannose--protein O-mannosyl transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.858554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGCGA CGACGGCTCA CCTGCCCTGG ACGGCGACCG GTCGCGGGGA CGCGGCGCGG
GTGACCGGCC CGGGTTCCGC CGGCCCGGCC GGCGGTCGGG CGCTCTCGGT GCGTGAGCGG
CTGTGTCCAC CGATGCCGCG GTCGCCGCTC ATGGGGTGGC TGGCGACCCT GTCCGTCGCG
ATCGTCGCCG GGCTGCTGCG TTTTTGGCAC CTCACGGAGC CCCGCGGGAT CTACTTCGAC
GAGGTCTACT ACACCAAGGA CGCCTGGGGC CTGCTGACGG CCGGGTATGA GATCAACTCG
ACGACCTGTT CCGGTCCGGC CTACGTCGTC CATCCGCCGT TCGGCAAATG GCTGATGGCC
GCCTCCGAGG GCCTGTTCGG CTATACCGAC TGTGCCGGGG TCCCGCACGG CAGTCCGGAG
CTCGGCTGGC GGTTCTCGTC CGCGCTGTTC GGGACGCTCG CCGTCCTGGT CCTCGCCCGC
GCCGCCCGAC GGATGTTCCG CTCCACGCTC CTGGGCTGCT TCGCCGGTCT GCTCCTCGCC
CTCGACGGGC TGGAGTTCGT GCAGAGCCGC ATCGGGATCC TCGACATCTT CCTGATGACC
GGCGTCGTCG TAGCGCTGGC CTGTCTGCTG CTCGACCGGG ACGACGGCCG CCGCCGGCTC
GCCGACCGGC TGGAACCGGT TGGTTCCAGC CCCGGCTCAG CACCCCTGGG GGACGAGGCC
GCCGGCCCGG ACGGCGGTAC GGACGCCGGC CCGGACGGCG GCCCGACCAC GACGGCTCCG
CCCACCCGGG CCGACCGCCT CCTCGACATG TACGGGCCGC GGCTGGGGTT CCGCCCCTGG
CGGCTGGCCT GCGGAGCGGC CCTGGGACTG TCCATGGGGG TGAAGTGGAG CGCCCTCTAC
ACGATCATCG GCTTCGCGGC GCTCGCCCTC GCGTGGGACA TCGGAGCACG GCGCACCGGC
GGAGCCCGCC GACCCGTGCT GGGAGCACTG CGCCGGGACA GCCCGGCCTG GTTCGCCGCG
TTCGTACTCG TCCCCATCGT GACCTTCCTC GCCACCTGGA CCGGCTGGTT CGTCACCGAC
GGCGGCTACT ACCGCCACTA CTACGGCAAC GGTTTCGGCG CCGCGTGGCA CGGCTGGTGG
AAGTACCAGA TGGCGGTGCT GAAGTTCCAC GAGGGACTCC ACGAGGGGCA CGCCTTCGCG
TCGCATCCGA TGAGCTGGCT GGTGATGGCG CGGCCGGTCG CGTACTACTA CTCCTCGCCG
GCGTACGGGA CCTCGGGCTG CCACGATCCG GCCGGCTGCT CCCGGGAGGT CATCGCCCTG
GGCAACCCGG CGATCTGGTG GGTCGGCACG GCGGCACTGG TCGCGATGCT CGCCTGGTGG
GTCTCCCGGC GGGACTGGCG GGCGGCCCTG GTGCTGGTCG GGTTCGGCTC GGCCTTCGTG
CCGTGGCTGC TGTTCCCGAA CCGCACGATG TTCTTCTTCT ACGCGCTGCC GTCGCTGCCG
TTCCTGGTCC TCGCCATCAC GGCGCTGGCC GGGCTCGTCC TCGGCCCGCG CGAGGCGTCG
GAGACCCGCC GCCTGGTCGG GGCGCTGTCG GTCGGGGTCT ACACGATCAT CGTCGTGCTG
CTCTTCGCGT ACTTCTACCC GATCCTGGCC GCCGAGGTGA TCCCCTACTC CTCGTGGCGC
GCCCGGATGT GGTTCCCGGG CTGGATCTGA
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| Protein sequence | MTATTAHLPW TATGRGDAAR VTGPGSAGPA GGRALSVRER LCPPMPRSPL MGWLATLSVA
IVAGLLRFWH LTEPRGIYFD EVYYTKDAWG LLTAGYEINS TTCSGPAYVV HPPFGKWLMA
ASEGLFGYTD CAGVPHGSPE LGWRFSSALF GTLAVLVLAR AARRMFRSTL LGCFAGLLLA
LDGLEFVQSR IGILDIFLMT GVVVALACLL LDRDDGRRRL ADRLEPVGSS PGSAPLGDEA
AGPDGGTDAG PDGGPTTTAP PTRADRLLDM YGPRLGFRPW RLACGAALGL SMGVKWSALY
TIIGFAALAL AWDIGARRTG GARRPVLGAL RRDSPAWFAA FVLVPIVTFL ATWTGWFVTD
GGYYRHYYGN GFGAAWHGWW KYQMAVLKFH EGLHEGHAFA SHPMSWLVMA RPVAYYYSSP
AYGTSGCHDP AGCSREVIAL GNPAIWWVGT AALVAMLAWW VSRRDWRAAL VLVGFGSAFV
PWLLFPNRTM FFFYALPSLP FLVLAITALA GLVLGPREAS ETRRLVGALS VGVYTIIVVL
LFAYFYPILA AEVIPYSSWR ARMWFPGWI
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