| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3965 |
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| Symbol | |
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| ID | 3906925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4745151 |
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| End bp | 4745975 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637881293 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_483044 |
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| Protein GI | 86742644 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.659781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCGAA ACTCTGGCCG GTCGGGTGAT CCGCCGCCAC CGCCGGACCC TCTTCCCGTG
GCCGTGGTCG ACAGCCACTG TCATCTCGAC CTGATGGGCA CCGAAGTTCC GGCGGCGATC
GCGGCGGCCC GGGCGGTCGG TGTCACGCGG GCCGTCACCG TCGGCATCGA CCTGCCCACC
AGCAGATGGC AGGCCGAGGT TGCCGCGGCG CATCCGGAGA TCTACGCCGC CGTCGCGATT
CATCCCAACG AGGCGGCCCG GGGGGTCACC GAGGAGACGT TCGCCGCCAT CGCCGAGTTG
GCCCGCGCCG ATCGCGTGCG CGCGGTCGGC GAGACGGGCC TGGACTACTT TCGCACCCCA
CCCGAGGCGC ATGCCGTGCA GCAGGAGAGC TTCCGGCGCC ACATCGCGAT CGCCAAGGAG
ACCGGCCGGG CGCTGATGAT CCACGACCGG GACGCCCACG ACGACACGCT GCGTATCCTC
GCCGAGGAGG GCGCCCCGGA GAAGGTCGTC TTCCACGCCT TCTCCGGGGA CACGGCGATG
GCGAAGATCT GCGCGGACGC CGGGTACGTG ATGTCGTTCG CCGGCAACGT CACCTTCTCC
AATGCCGCCA ATCTGCGGGA GGCGGCGGCC GTCGCTCCGG CGGATCTCAT CCTGGTGGAG
ACCGACGCGC CGTTCCTCAC CCCGACCCCC TGGCGGGGCC GGCCCGGCGG CCCGTACCTC
ATTCCGCTGA CGCTGCGGGT GCTGGCCGAG ACCCGCGGCG TCGGCGTCGC CGAGCTCGGC
ACGCACATCG CCGCGAACGC GGAGCGGGTG TTCGGGCCCT GGTAG
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| Protein sequence | MARNSGRSGD PPPPPDPLPV AVVDSHCHLD LMGTEVPAAI AAARAVGVTR AVTVGIDLPT
SRWQAEVAAA HPEIYAAVAI HPNEAARGVT EETFAAIAEL ARADRVRAVG ETGLDYFRTP
PEAHAVQQES FRRHIAIAKE TGRALMIHDR DAHDDTLRIL AEEGAPEKVV FHAFSGDTAM
AKICADAGYV MSFAGNVTFS NAANLREAAA VAPADLILVE TDAPFLTPTP WRGRPGGPYL
IPLTLRVLAE TRGVGVAELG THIAANAERV FGPW
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