| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3946 |
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| Symbol | |
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| ID | 3906905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 4724119 |
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| End bp | 4725405 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637881273 |
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| Product | tyrosyl-tRNA synthetase |
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| Protein accession | YP_483025 |
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| Protein GI | 86742625 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0162] Tyrosyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.769187 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACACG CGCTCCTGGA CGAGCTGTCC TGGCGTGGAC TCCTCCACGA CAGCACCGAT
CCCGCCGAGC TGCGGGAGCA CCTCGACAGC GGACGGCGGC GCTGCTACAT CGGCTTCGAC
CCGACGGCCC CCTCGCTGAC GATCGGCAAC CTGCTGCCGA TGACCCTGCT GATCCGGGCC
GCACGGGCGG GGATCGGCGC GGTCACCCTG TTCGGCGGTG GCACGGGTCT GATCGGCGAC
CCGTCGGGCA AGTCGGTGGA ACGTAGCCTG CTCACCGCCC AGGAGGTACG GACGAACATG
CTCGGACAAC AGGAGATCAT GGAGTCCGTC TTCGCCCGGG CCCTGGACTC CGGCCAGCTA
CCACAGTTCG TCGACAACGC CGACTGGCTC GACGGACTCG GAATGATCGA GTTTTTGCGG
GACGTCGGCA AGCACTTCCC CGTCACCGAG ATGGTCCGCC GTGACTCGGT GCGCCGGCGG
CTGGACGATC CCGACGTCGG CCTGACCTAC ACCGAGTTCA GCTACTCCCT GCTCCAGGCG
TACGACTTCC GCCGCCTGTG CGAGGACCAC GGGGTCACCC TTCAGATGGG CGCCTCCGAC
CAGTGGGGCA ACATCGTCGC CGGGATCGAC TACGTGCGAC GGGTGCTGCG CACCCAGGTA
CACGGGCTGA CCTGCCCGCT GCTGCTGCGT TCGGACGGCA CGAAGTTCGG CAAGTCGGAG
AAGGGTGCGG TCTGGCTCTC GGCCGACCGT ACCTCGCCCT ACACCCTGTA CCAGTTCGTG
ATCAATCTGT CCGACGACGA GGCACGCCGG TTCGCCCTGT TCTTCTCGCT CATCGACCGT
GAGCCGCTGG AGCGGCTGTT CGCCGAGCAC GCCGAGGCTC CGGGTAAGCG GGCGTTGCAG
CGTCACCTGG CGCGGGAGAT CACCGCACTG GTGCACGGTC AGGCCGCGGT GGACGCGGCC
GAGGCGGCGT CGGCGGCGTT GTTCAGCGGG GACGTGAAGG CGATCGGCGC GGATCTGCTC
TCCGACGTCT TCGCCGACGT GCCCACGGTC GAGGAGCCGG CCGCCCGGCT CGAGGATGAC
GGCTGGCCGG TTGTCGATCT GCTGATCGCC ACCGGCCTCG CCAGCAGCAA GCGGGATGCG
CGCGAGCACC TGGGCAACCA TGCGGTCCTG GTGAACGGGG AACGGGTCGG CGTGGAAGCC
ACCGTCGGGA CCAAGGATCT GCTGCACGGC TCGGTCATCC TGGTCCGCCG CGGTCGCCGG
GAATGGCGGG TGGCCCGCTT CACCTGA
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| Protein sequence | MTHALLDELS WRGLLHDSTD PAELREHLDS GRRRCYIGFD PTAPSLTIGN LLPMTLLIRA
ARAGIGAVTL FGGGTGLIGD PSGKSVERSL LTAQEVRTNM LGQQEIMESV FARALDSGQL
PQFVDNADWL DGLGMIEFLR DVGKHFPVTE MVRRDSVRRR LDDPDVGLTY TEFSYSLLQA
YDFRRLCEDH GVTLQMGASD QWGNIVAGID YVRRVLRTQV HGLTCPLLLR SDGTKFGKSE
KGAVWLSADR TSPYTLYQFV INLSDDEARR FALFFSLIDR EPLERLFAEH AEAPGKRALQ
RHLAREITAL VHGQAAVDAA EAASAALFSG DVKAIGADLL SDVFADVPTV EEPAARLEDD
GWPVVDLLIA TGLASSKRDA REHLGNHAVL VNGERVGVEA TVGTKDLLHG SVILVRRGRR
EWRVARFT
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