Gene Francci3_3942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3942 
Symbol 
ID3906901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4719317 
End bp4720033 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content72% 
IMG OID637881269 
Productserine O-acetyltransferase 
Protein accessionYP_483021 
Protein GI86742621 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.426146 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGTCCA CTGAGATCGA GCGTGTCAAC GGCCCCGGCC CCGGTGCCCC TCTCGGGTCC 
GGCGGGTCCG CCGGACCCGA CTCCGCAGGG AGCGACTCCG CAGGGAGCGG CGCCGTCCGA
GCCGATCAGC CCGCAGCCGC CCCGTCCCCC CGGGTAGCCG AGACGGACGG CGACCAGGAC
ACCCGGGATG CCTCCGACCT CGGGCTGTGG GAGATCCTGC GGGAGGACTG GCGCCGGCAC
TACAAATCGT TCGCCCACCC GGGGCTGCAC GTGCTCGCCG TCTATCGCAT CGGGCAGTGG
CGGCGCACCC GCAGCCAGCC CGTCCGCGGG ATCGTGACCG TCTTCTACAA GGTGGTCAAC
AAATTGGTCA TCCGTAACCT GTACGGGGCC GAGCTCGACG AGCAGGCGCG GATCGGCCGC
CGGGTCCACA TCGGCCATCA CCAGACGATC CTCATCCCGC CGCACTGCGT GATCGGGGAC
GACTGCACCC TGCGGCACAA CTTGACCATC GGCTACGCGA GCGGTACGGC GGGCCCGCGG
GACGTGCCGA AGGTCGGCAA GCGGGTCGAG CTCGCCCCCG GGGTCCACCT CATCGGGGCG
ATCAGCATCG GCGACGACGC CAGGATCGGT CCGGGCTCGA TCGTGATGAC GGACGTGCCG
GCGGGCTCGA CCGTCTTCGC CGCTCCCGCG CGGGTGATGC GCCCACCGGG GCGTTGA
 
Protein sequence
MVSTEIERVN GPGPGAPLGS GGSAGPDSAG SDSAGSGAVR ADQPAAAPSP RVAETDGDQD 
TRDASDLGLW EILREDWRRH YKSFAHPGLH VLAVYRIGQW RRTRSQPVRG IVTVFYKVVN
KLVIRNLYGA ELDEQARIGR RVHIGHHQTI LIPPHCVIGD DCTLRHNLTI GYASGTAGPR
DVPKVGKRVE LAPGVHLIGA ISIGDDARIG PGSIVMTDVP AGSTVFAAPA RVMRPPGR