| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3924 |
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| Symbol | |
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| ID | 3906883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4692124 |
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| End bp | 4694172 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637881251 |
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| Product | signal peptide peptidase A |
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| Protein accession | YP_483003 |
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| Protein GI | 86742603 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCCA TCCCACGTAA GGCGCTGGCC GACGTCCGCC AGATCGCGGC GCGGCGGACG
GCTCCGATCG TCCTTGAACT CGATCTGACG GTCGACCCGA TCGAAGGCGT CCCCACCGAC
CCGATCACCC TGGCGCTCGC CCGGCGTCGG ACGACCCTGC GGGATGTCGT CGAAGGCCTA
CGGTACGCGA CCGAGGATCC CCGGGTGTCC ATCGTGGTCG CGCATATCGC CGCCTGCGGG
ATGCCGCTGG CACGTATCCA GGAGATTCGC GCCGCGATCG CCGCGTTTCG TGCGGCCGGT
GGCACCGCCA TCGCCTACGC GGACACCTTC GGGGAGTTCG GGGGCGGCAC GGCGCCCTAC
TATCTGGCCT GCGCGTTCGA CGAGATCTGG CTCGCCCCGC CCGGTGACTG CGGCCTGACC
GGTCTCGGGA TGGAGGCGCC GTTCCTGCGG GGAGCGCTCG ACCGGCTCGG TATCTCCGTC
GAGATCGGCC AGCGGTACGA GTACAAGAAC GCCGTCAACA CGCTGGTGGA GCGGGACTTC
ACCCCGGCGC ACCTGGAGGC GGTCAGCCGG ATCATCGAGT CCAGCTCTGA CCAGATCGTG
GCCGGCATCG CCGAGGGACG CGGGCTGTCC ACCGACCGGG TTCGGCGTCT GATCGATCTC
GGACCGCTGG CCGGGTCCGT CGCGCTCGAC ACCGGTCTCG TCGACCGTCT CGGCTACCGC
GACGAGGTGT ACGCGGCGGC ACGGGAACGG GTGACGCGGG GGCCGTCGGC CGGATTCGGG
GGTGACGGGG AGGGCGCGGG CCGGGAGGAT GCGCGCCGCG GGTCCGGCGC GGAGCCGGTT
TTGATGTACG CCTCCGCCTA CCGGCGGTCC GCCGAGCGGC GGGAGAAGTT CCCGGCGCTT
CGCGTGGCGG CGCTGGCGGC CGGCGGTCCG GCGGCTTTCT TCTTCCGCGA GGTTCCCGAT
GATCGGGACG GCTCCCGTCC CGACGGCGCC GGGGAGGCCC ACCTCCACCC GGACGAGGCC
GCGGGCAGCG GGACGAGTGC GCTGGCCCCC TCCGTGACGG CGCCACATCG AGACCCGAAG
AAGTCGGTCA TCGCGCTCAT CCATGGGACC GGGCCGGTCG TCCTCGGACA CGGTGCCCCG
GGTCCGTTCT CCGGGCCGGT GCTCGCAGCG GAGGCCACCG CGGCGGCCTT CCGTTCCGCC
GCGCGTGATC CCGCGGTGGC GGCGGCGGTG TTCCGGGTGA GCAGCCCTGG GGGTTCCTAC
GTCGCCTCCG ACCTGGTCCG CCGGGAGGCC GAGCGGTTCC GGGCCAGCGG CCGGCCGCTG
ATCGTCTCGA TGGGTGACGT GGCGGCCTCT GGTGGCTACT TCGTCGCCCT GGCATCCGAT
GCGATCGTGG CGAACCCCGG CACGCTGACC GGCTCGATCG GGGTGTTCGC CGGCAAGCAG
GTGATCAGCG GGCTGCTCGA CAAGGTGGGA GTGGGCTTCG GTGCCGTCGC GGAGGGCGAG
CATGCGCTGA TGATGTCGCC GCGGCGGCCC TTCACCCCGG GGGAGCGGGA GAAACTGGAG
GAGTTCCTGG ACCGGGTCTA CGCCGACTTC GTTGACAAGG TGGCGGTCGC TCGCGGGCTG
TCCCGGGACC AGGCGCACCA GCTGGCCCGC GGCCGGGTGT GGACCGGCGC GGACGCCCAT
GCGCACGGCT TGGTGGACGT CCTCGGCGGG TTGGCGCAGG CGATCGAACT CGCCTGGTCG
CGCGCCGGTC TGCCGGCCGG TGAGACTCCG CGGGTGCGGC TGACGCCCAA GCCGTCGGTG
CTGGAACGGG TCCGGTCGCC GAAGTCCAGC GAGGACCGCG GGGCCGCCGC GTCGGTGGCC
GGGTCGGTGG CCGGGTCGGT GGCCGGGTCG GTGGCCGGGT CGGTGGCCGG GTCCGCCCTG
GGCCTGCTCG GCGCTGGTCC CGGTGCCGGC TTCGTCCCGG GTTGGGGGGC GCTGGCACCG
CTGGCGGCGC GGCTTGGTCT GCCCTCGGCC GGTCCGCTGG TCATGCCGCC GATCGGGCGG
ATCGGTTAG
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| Protein sequence | MAAIPRKALA DVRQIAARRT APIVLELDLT VDPIEGVPTD PITLALARRR TTLRDVVEGL
RYATEDPRVS IVVAHIAACG MPLARIQEIR AAIAAFRAAG GTAIAYADTF GEFGGGTAPY
YLACAFDEIW LAPPGDCGLT GLGMEAPFLR GALDRLGISV EIGQRYEYKN AVNTLVERDF
TPAHLEAVSR IIESSSDQIV AGIAEGRGLS TDRVRRLIDL GPLAGSVALD TGLVDRLGYR
DEVYAAARER VTRGPSAGFG GDGEGAGRED ARRGSGAEPV LMYASAYRRS AERREKFPAL
RVAALAAGGP AAFFFREVPD DRDGSRPDGA GEAHLHPDEA AGSGTSALAP SVTAPHRDPK
KSVIALIHGT GPVVLGHGAP GPFSGPVLAA EATAAAFRSA ARDPAVAAAV FRVSSPGGSY
VASDLVRREA ERFRASGRPL IVSMGDVAAS GGYFVALASD AIVANPGTLT GSIGVFAGKQ
VISGLLDKVG VGFGAVAEGE HALMMSPRRP FTPGEREKLE EFLDRVYADF VDKVAVARGL
SRDQAHQLAR GRVWTGADAH AHGLVDVLGG LAQAIELAWS RAGLPAGETP RVRLTPKPSV
LERVRSPKSS EDRGAAASVA GSVAGSVAGS VAGSVAGSAL GLLGAGPGAG FVPGWGALAP
LAARLGLPSA GPLVMPPIGR IG
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