Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3916 |
Symbol | |
ID | 3906874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 4684235 |
End bp | 4684993 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637881242 |
Product | hypothetical protein |
Protein accession | YP_482995 |
Protein GI | 86742595 |
COG category | [S] Function unknown |
COG ID | [COG4760] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGACC TTCGTTCCTC GAACCCCGCG TTCCGTCGCG GTGGGTTCGC GTCTCCTCCC ACGCCGACCC CCGAGGAGCT GGCGAGCCAC TACCGCCAGC CCACCACCCT CACGATCGAC GACGTCGTCG TGCACACGCT GGGGCTGTTC GCGCTGCTGG CGGTCGGTGG CGCGGTCGGC TGGGCCCTCG CGCCGGACTC GCCCGGCATC GCGCTGGGGG CCGGCCTCGT CGCCCTGGCG ATCAGCCTGT TCGTCTCGTT TCGCAACCTG ATCAGTCCGC CGCTCATCAT CGCCTTCGCC CTGATCGAAG GGGTGGCGGT CGGGGCGGTC TCGCGCTACT ACGAGAACGC CTTCAACGGC ATCATCCCGC AGGCCCTGCT CGGGACCGGT CTGATCTTCG TCGCGATGCT GGTCGCCTAC CGTAGTGGTC GGCTACGGGC CACCCCCCGG ATGGCCCGTA TCGTGTTCGG CGTGCTCCTC GGGGTCGTGC TCCTCGGCCT GACCGACCTC GTGATCAGGG CCACCAGCGG AAGCCACCTG CCGGTGATCA ACGATGCGAC GCCGCTCGGC ATCCTGTTCA GCCTGCTTGT GCTCGGCGTC GCGAGCCTGC AGTTCATCCT CGACTTCGAC TACATCGAGC GGGCGATCGC GTCCCATGCG CCGCGTTCCG AGGCGTGGCG GGCGGGATTC GGCCTGCTGA TCGGCTTCGT CTGGGTCTAC CTGGACACGC TGCGCCTGCT CTCCAAGCTG CGGCAGTAG
|
Protein sequence | MADLRSSNPA FRRGGFASPP TPTPEELASH YRQPTTLTID DVVVHTLGLF ALLAVGGAVG WALAPDSPGI ALGAGLVALA ISLFVSFRNL ISPPLIIAFA LIEGVAVGAV SRYYENAFNG IIPQALLGTG LIFVAMLVAY RSGRLRATPR MARIVFGVLL GVVLLGLTDL VIRATSGSHL PVINDATPLG ILFSLLVLGV ASLQFILDFD YIERAIASHA PRSEAWRAGF GLLIGFVWVY LDTLRLLSKL RQ
|
| |