Gene Francci3_3916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3916 
Symbol 
ID3906874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4684235 
End bp4684993 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content69% 
IMG OID637881242 
Producthypothetical protein 
Protein accessionYP_482995 
Protein GI86742595 
COG category[S] Function unknown 
COG ID[COG4760] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACC TTCGTTCCTC GAACCCCGCG TTCCGTCGCG GTGGGTTCGC GTCTCCTCCC 
ACGCCGACCC CCGAGGAGCT GGCGAGCCAC TACCGCCAGC CCACCACCCT CACGATCGAC
GACGTCGTCG TGCACACGCT GGGGCTGTTC GCGCTGCTGG CGGTCGGTGG CGCGGTCGGC
TGGGCCCTCG CGCCGGACTC GCCCGGCATC GCGCTGGGGG CCGGCCTCGT CGCCCTGGCG
ATCAGCCTGT TCGTCTCGTT TCGCAACCTG ATCAGTCCGC CGCTCATCAT CGCCTTCGCC
CTGATCGAAG GGGTGGCGGT CGGGGCGGTC TCGCGCTACT ACGAGAACGC CTTCAACGGC
ATCATCCCGC AGGCCCTGCT CGGGACCGGT CTGATCTTCG TCGCGATGCT GGTCGCCTAC
CGTAGTGGTC GGCTACGGGC CACCCCCCGG ATGGCCCGTA TCGTGTTCGG CGTGCTCCTC
GGGGTCGTGC TCCTCGGCCT GACCGACCTC GTGATCAGGG CCACCAGCGG AAGCCACCTG
CCGGTGATCA ACGATGCGAC GCCGCTCGGC ATCCTGTTCA GCCTGCTTGT GCTCGGCGTC
GCGAGCCTGC AGTTCATCCT CGACTTCGAC TACATCGAGC GGGCGATCGC GTCCCATGCG
CCGCGTTCCG AGGCGTGGCG GGCGGGATTC GGCCTGCTGA TCGGCTTCGT CTGGGTCTAC
CTGGACACGC TGCGCCTGCT CTCCAAGCTG CGGCAGTAG
 
Protein sequence
MADLRSSNPA FRRGGFASPP TPTPEELASH YRQPTTLTID DVVVHTLGLF ALLAVGGAVG 
WALAPDSPGI ALGAGLVALA ISLFVSFRNL ISPPLIIAFA LIEGVAVGAV SRYYENAFNG
IIPQALLGTG LIFVAMLVAY RSGRLRATPR MARIVFGVLL GVVLLGLTDL VIRATSGSHL
PVINDATPLG ILFSLLVLGV ASLQFILDFD YIERAIASHA PRSEAWRAGF GLLIGFVWVY
LDTLRLLSKL RQ