Gene Francci3_3904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3904 
Symbol 
ID3906672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4672177 
End bp4672659 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content70% 
IMG OID637881230 
ProductGreA/GreB family elongation factor 
Protein accessionYP_482983 
Protein GI86742583 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01462] transcription elongation factor GreA 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0764375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCAGC AGACTTGGCT CACCCAGGAG GCATACGACC GGCTCCGCTC CGAGCTCGAC 
TACCTGACCG GCCCGTGGCG TACGGAGATC GCGACCAAAA TTGAGGCTGC CCGCGAGGAG
GGCGACCTCA AGGAAAACGG CGGCTACCAC GCGGCCAAGG AGGAGCAGGG CAAGCAGGAG
GCCCGGATTC GCCAGCTCAC GGACCTGCTG CGCGACGCCC AGGTCGGCGA GGCACCCGCG
GCGACCGGCG AGGCCGGCCC CGGCACCGTC GTCGAGGTGC GCTTCTCCGG CGAACGGGAG
ACGGAGAAGT TCCTCATCGG CTCGCGTGAG GACCACAGCA CGCCCATCGA GGTCTTCTCC
CCGGCGTCCC CGCTAGGCGG CGCGGTGAGC GGGCACAAGG CGGGCGAGAC CGTCTCCTAC
ACGCTGCCCA ACGGCCGTTC GGCCAAGGTC GAGATCGTCT CGGTGTCGCC CTACTCGGGC
TGA
 
Protein sequence
MTQQTWLTQE AYDRLRSELD YLTGPWRTEI ATKIEAAREE GDLKENGGYH AAKEEQGKQE 
ARIRQLTDLL RDAQVGEAPA ATGEAGPGTV VEVRFSGERE TEKFLIGSRE DHSTPIEVFS
PASPLGGAVS GHKAGETVSY TLPNGRSAKV EIVSVSPYSG