| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3885 |
|---|
| Symbol | |
|---|
| ID | 3906653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 4648676 |
|---|
| End bp | 4649254 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637881211 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_482964 |
|---|
| Protein GI | 86742564 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGTAC GTTCCTTAAG CGTGGCGGTC ACCAACAACG CGGTGATCGG TGTGGCCCTG
GGCTACATCG AGGCAAATCC GGACGAAGTG GACCTCATGC GGTCCTTGGT CGTGCTGGCT
CTGCACGGGC CATCCATCAC AGCCCGTAGC ACGATGCCGG CCCATGTCAC GTGCCGAGCC
GCGATCGTGT CCCCGGACTG GCGGGTGCTG GAGATCCTGG AGCCGTCCAC CGCGGTCTGG
CGGATGCCCG GCGGTCATGT CGATGCCGAC GACTCCTCGC TGCTCGGCGC CGCGCTCGGG
CTCGCTGCGC GCCGGGCCGG TGTCGAGGCC GACGCGGTGA TCCCGGGCGG GATCCTCCCG
TTCGACGTGG AGGTCAGAAT CGTCGACGCC GCGCCGATCC TCGGTGAACC CGAGCACGTG
CACTACGACA TGACCTATCT CTTCCACGTC GAGGACCGCA GCCTCGCGGT GCGGGAGAGC
GCCACGACGC AGGTTCGGTG GGTGGCGCCC GAGCGGATTT CCGGCCAGCT GGGCGCGAAG
CTGACCAGGG CGTCCCAGCA GGCCGGGCTG GTGCGCTGA
|
|---|
| Protein sequence | MPVRSLSVAV TNNAVIGVAL GYIEANPDEV DLMRSLVVLA LHGPSITARS TMPAHVTCRA
AIVSPDWRVL EILEPSTAVW RMPGGHVDAD DSSLLGAALG LAARRAGVEA DAVIPGGILP
FDVEVRIVDA APILGEPEHV HYDMTYLFHV EDRSLAVRES ATTQVRWVAP ERISGQLGAK
LTRASQQAGL VR
|
|---|
| |