Gene Francci3_3884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3884 
Symbol 
ID3906652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4648239 
End bp4648589 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content69% 
IMG OID637881210 
Productputative transcriptional regulator 
Protein accessionYP_482963 
Protein GI86742563 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGCA AGCATAGGCT GATCAGGGTG GAGCTGTCCT CGTTCTGCCC GCGCTACCAC 
CATGCCGTCG AGACCATCGG GCGGCGCTGG ACCGGGGCCA TCGTACGCGC GATGCTGGCC
GGCGCAACCC GGTTCTCCGA GATCACGACG GCGGTGCCCA ACCTGTCCGA CCGGCTCTGT
TCCGTACGGC TGAGGGAACT CGAAGCCGAA GGGATGGTCA GACGCACCGT CGTCCCGGAC
ACGCCCGCGC GGACCGAGTA CCACCTGACC GCGAAGGGAG CGGACCTCGC GGACACGGTC
GCGGCTCTCT CCCTCTGGGC CGAGACCTGG CTCCCCGACC CGTCCTGCTG A
 
Protein sequence
MAGKHRLIRV ELSSFCPRYH HAVETIGRRW TGAIVRAMLA GATRFSEITT AVPNLSDRLC 
SVRLRELEAE GMVRRTVVPD TPARTEYHLT AKGADLADTV AALSLWAETW LPDPSC