| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3872 |
|---|
| Symbol | |
|---|
| ID | 3906640 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 4634762 |
|---|
| End bp | 4636243 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637881198 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_482951 |
|---|
| Protein GI | 86742551 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1322] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACACGA CCAGCGCGCT GCTGGCCCTG ATCGGGCTGG CTCTCGGCGC CATGGGCGGA
TTCGCCGCCG CGCGCCGCTT CGCCGAGCCG CGGGTTGCCG CGCTCACGGC TGCGCACGCC
ACCGCCGTGC GGGAGCGCGA CCAGGCCCGG GAGACCGCCG CCGCCGCTGC CGAGCGTGCG
ATGCTGGCCG AGTCGGACGT GTCCAGCCTG CGCACCGCGC TGGAGTACGA GCAGCGAGCG
GCGGGCGAGC GGGTGGCGCT GGTCGAGCAG AGCCAGGACC GGCTTGCCGA GAGCTTCCGA
GCGCTGTCCG CGCAGGCTCT GGAGGGCGCG AGCCGTCAGC TGGTAGAGCT GGCCTCCGCC
CGGCTGGACG AGGCCGGCGC CCGCGCCCGC GGCGACCTCG ACGCCCGTCG TTCGGCGGTC
GAGAGCATGG TGACGCCGCT GCGGGAGGCT CTCGGGCGGA TGGAGGACCG GCTGCGGGAG
CTGGAGACCG CGCGCACTGA GGCCTACGCG GCACTCGTCG AGCAGGTGCG GTTCGCCCGC
GAGGCGTCGG AGAACCTCCG GTCGCAGACC GCCGCGCTCG TGACCGTGCT GCGCCGGCCC
CAGGCCCGCG GTGCCTGGGG CGAGATGCAG CTGCGCCGGG TGGCGGAGGT GGCCGGCATG
CTCAACCGCT GCGACTTCAC CGAGCAGATG ACGATCCAGG GCGACGACGG CCCGCAACGG
CCCGACATGG TCGTCCACCT TGCCGGTGGC CGCAACGTGG TCGTCGACGC GAAGGTTCCG
CTCAGCGCGT TCCTGGAGGC CGCCGACACG ACGGACGAGG AGCATCGCGC GCGCCGGATG
GCCGCCCATG CCCGCCATCT GCGTGCGCAT GTCGACGGCC TCGGCGCCAA GTCCTACTGG
CGGCGGCTGC CGTCATCCCC GGAGTTCGTG GTGCTCTTCG TCCCCGCCGA GGCGTTCCTG
GCCCCTGCCC TCGATCACGA TCCCGGCCTG CTCGAACACG CCGCAGGCAA GAAGGTCATC
ATCGCCACCC CAACCACGCT GATCGCTATG CTGCGGACCA TCGCCCACGC TTGGACTCAG
GATGCGCTGA CCGCACGGAC GAAGGAGATC TTCGAGCTGG GTCGCGACCT CTACACCCGC
CTCGGCACCC TGGGCGAACA CGTCGATCGC CTCGGTCGCT CGCTCGGCCG GGCGGTGGGG
GACTTCAACG CCACCGTCGG CTCGTTGGAA AGCCGGGTGC TGACCCCCGC CCGCCGGCTC
GCGGCCATGG AAGTCGTCGA GGCGGGGCTC CCCAGTCCGG TTCCGGTAGA GACCGGCGTG
CGGCCGCTGT CCGCCGCCGA GCTCCTGAGG AGCACCGGGG AGGGCGCGAC GACCGGGCGG
GGTGGCGCCA TGGAGGACCC CGGAATCGAT GTCGGGTACC AGACCCCTGA CGGCGCAGAT
CCGGCCAGAT GGGACGCGAA CGACCAGCAT AAGGAGGATT AA
|
|---|
| Protein sequence | MDTTSALLAL IGLALGAMGG FAAARRFAEP RVAALTAAHA TAVRERDQAR ETAAAAAERA
MLAESDVSSL RTALEYEQRA AGERVALVEQ SQDRLAESFR ALSAQALEGA SRQLVELASA
RLDEAGARAR GDLDARRSAV ESMVTPLREA LGRMEDRLRE LETARTEAYA ALVEQVRFAR
EASENLRSQT AALVTVLRRP QARGAWGEMQ LRRVAEVAGM LNRCDFTEQM TIQGDDGPQR
PDMVVHLAGG RNVVVDAKVP LSAFLEAADT TDEEHRARRM AAHARHLRAH VDGLGAKSYW
RRLPSSPEFV VLFVPAEAFL APALDHDPGL LEHAAGKKVI IATPTTLIAM LRTIAHAWTQ
DALTARTKEI FELGRDLYTR LGTLGEHVDR LGRSLGRAVG DFNATVGSLE SRVLTPARRL
AAMEVVEAGL PSPVPVETGV RPLSAAELLR STGEGATTGR GGAMEDPGID VGYQTPDGAD
PARWDANDQH KED
|
|---|
| |