Gene Francci3_3866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3866 
Symbol 
ID3906634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4630081 
End bp4630584 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content71% 
IMG OID637881192 
ProductNUDIX hydrolase 
Protein accessionYP_482945 
Protein GI86742545 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID[TIGR00586] mutator mutT protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.190486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGG ATGTGGAGGG CTTGGATGCC CTCCCTTCTA CCCATGGACG ACGGCGTGGA 
ACACCCGAGG ACCGGGACGG CACCGACTCC CCGGTGGTGA AGGGACGTCT GGTCGTCGCC
GTCGCGCTGC TCGACGATGA TCGCCGGGTG CTGGCCGCCC GGCGCCGGGA ACCGCATCCC
TACGCCGGGA TGTGGGAGTT TCCGGGCGGC AAGGTCGAGC CCGGCGAGCA CGAGCTCGAC
GCGCTCGTCC GGGAGTGCCG GGAGGAGCTC GACGTCGAGA TCGAGGTCGG TCCGCCGCTC
GGTGAGGTCG GGCTGTCCAG CCCCGGATGG GTGCTGCGGG TGTGGCTCGG CCGGGTGACG
CGCCAGCAGC CCCGGCTCGT CGAACATGAC GAGCTGCGCT GGCTCGGCGT GGCCGAACTG
GACGATGTCC GGTGGATGCC GGCCGACGGT CCCCTGGTGG CGGAGCTGCG CCGCGTGCTG
TCGACTCCCG GATCGCTCTT CTGA
 
Protein sequence
MNADVEGLDA LPSTHGRRRG TPEDRDGTDS PVVKGRLVVA VALLDDDRRV LAARRREPHP 
YAGMWEFPGG KVEPGEHELD ALVRECREEL DVEIEVGPPL GEVGLSSPGW VLRVWLGRVT
RQQPRLVEHD ELRWLGVAEL DDVRWMPADG PLVAELRRVL STPGSLF