Gene Francci3_3861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3861 
Symbol 
ID3906629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4624310 
End bp4624954 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content69% 
IMG OID637881187 
Productflavin reductase-like, FMN-binding 
Protein accessionYP_482940 
Protein GI86742540 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.657973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.52723 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTAGCC CTGCGCACCG TGGAGAGAAC CGGGCCGGCG CGCCCGCCTC CCCGGTCTCT 
CCGGTCTCTC CGGTCTTCCA GGTCTCCCAG GCCGACCGGT CGATCCTGCG GACGGCGGAC
TTCCGCAGGG CGGTCGGCAG GTTCGCTACC GGAGTGACGG TTCTCACGAC CGTCGCCGAC
GGTCGCCATC TCGGCATGAC GGCGAACTCG TTCGTCTCGG TCTCCCTCGA CCCGCTGCTG
GTGCTCGCCA GCATCCGCCG GGACGCCCGC TTCCACGGTC CGCTCATGGC CTCGGGGGTG
TGGGGAGTCT CGGTGCTCGC CGAGGACATG GCCGAGACGT CGCGCTGCTT TGCGAAACGC
GCGTATGACC AGCCCGGCGA CATGTTCGCG GGATGGGAGC ACTCGATCGG GCCGGAGACC
GGAGTGGTCC TGTTCGACGG CGCGCTGTCG GTCTTCGAGT GCCGGACGGT CACGACCCAT
CCCGGGGGGG ATCACACCCT CGTCCTCGGT GAGGTCGTCT CGTTCGCCCA GCCGCGGGAC
GATGTCGGAC CGCTCGTCTT CTACGACGGG CGCTACCTCG ACCCGGTCGG TGCGGATACG
GGAGGAACAG AGGCGCGGAG GGAAACAGAC GGTTCCCGAA GCTAA
 
Protein sequence
MGSPAHRGEN RAGAPASPVS PVSPVFQVSQ ADRSILRTAD FRRAVGRFAT GVTVLTTVAD 
GRHLGMTANS FVSVSLDPLL VLASIRRDAR FHGPLMASGV WGVSVLAEDM AETSRCFAKR
AYDQPGDMFA GWEHSIGPET GVVLFDGALS VFECRTVTTH PGGDHTLVLG EVVSFAQPRD
DVGPLVFYDG RYLDPVGADT GGTEARRETD GSRS