Gene Francci3_3860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3860 
Symbol 
ID3906628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4623268 
End bp4624254 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content76% 
IMG OID637881186 
Producthypothetical protein 
Protein accessionYP_482939 
Protein GI86742539 
COG category[S] Function unknown 
COG ID[COG2912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.493821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.355777 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCC GCAGCCGCGG CAGGTTCGCC GAGGTCGTGC GCCGCGAGCC GATCGACCTG 
GCGGTCGCCT GCCATCTGCT CGCCGCCGAG GTCGACCCGG CAGCCGACGC CCCCGATGCC
ACCGCCACCC TGAGCGCCCT CGACGCATTC GCCGCGCAGG CCCGTCCACT GCTCGCCGCG
CGGACGACCT CGAGCCGACG GCCCCGGTTC CCCCGGGCCG AGCACGGTAC GCCGGTGGCA
CGCCAGACCG GCGCACCGGG ACAGGCACAG CCGGGACAGG CACAGCCGGA ATCCGGATCC
GAGGCGGCAG GGCGCCTGGA GGGGTTCGGC CCGGGAGCGG GGAATTTCGA TCCGAGGATC
GCCGCCGAGA CGCTGCACGA GTCCCTGGGG CTCGCCGCCG GCTTCGCCGG GGCCGAGGAC
GACTACACCG ACCTGCGCTC CTCGCTGCTC CCCGATGTGC TGCGCCGGCG GCGCGGCCTG
CCGATCCTGC TCTCCGTCGT CTGGCTGGAG GTGGCCGCCC GGCTCGGGGT CCCCGCCTAT
CCTGTCGGGC TTCCGGGGCA CGTCGTGGTC GCGGTGGGTT CCCCCCAGGA CCACGTGCTC
GTCGATCCGT TCGCCGCCGG TCGACTACTG ACGGTGCACG ACGCCGCGGA GAAGGTACGC
GCGGCCGGGT TCGCCTTCAC CCGTGCCCAC CTCGCCCCGA TGAGCGCGCA GGACGTGCTC
ACCCGGATCC TCGGCAACAT CCGGATCCTC GGGGCCCGCT CGGACGCGCC GCACATGCGG
CTGTGGGCCG TCGAGCTGTC CCTGCTGCTC CCCCACCACC CGGCGAGCCT GCGCCGGGAG
CGCGGCGAGC TCCGCGTCCG GTTGGGCGAC TTTCTCGGCG GGGCCACCGA TCTGACCGCG
TTCGCCGACA CGGTGGCCGC GGTCGAGCCA GCCGCCGCGG CGGCCGCCCG CCAGGCCGCC
GCCGCGGCCC GCGCCCGGCT CAACTAG
 
Protein sequence
MSTRSRGRFA EVVRREPIDL AVACHLLAAE VDPAADAPDA TATLSALDAF AAQARPLLAA 
RTTSSRRPRF PRAEHGTPVA RQTGAPGQAQ PGQAQPESGS EAAGRLEGFG PGAGNFDPRI
AAETLHESLG LAAGFAGAED DYTDLRSSLL PDVLRRRRGL PILLSVVWLE VAARLGVPAY
PVGLPGHVVV AVGSPQDHVL VDPFAAGRLL TVHDAAEKVR AAGFAFTRAH LAPMSAQDVL
TRILGNIRIL GARSDAPHMR LWAVELSLLL PHHPASLRRE RGELRVRLGD FLGGATDLTA
FADTVAAVEP AAAAAARQAA AAARARLN